[petsc-users] Error using Metis with PETSc installed with MUMPS
Barry Smith
bsmith at petsc.dev
Wed Nov 1 14:02:21 CDT 2023
Pierre,
Sorry, I was not clear. What I meant was that the PETSc code that calls MUMPS could change the value of ICNTL(6) under certain conditions before calling MUMPS, thus the MUMPS warning might not be triggered. I am basing this on a guess from looking at the MUMPS manual and the warning message that the particular value of ICNTL(6) is incompatible with the given matrix state. But I could easily be wrong.
Barry
> On Nov 1, 2023, at 1:33 PM, Pierre Jolivet <pierre at joliv.et> wrote:
>
> Victoria, please keep the list in copy.
>
>> I am not understanding how can I switch to ParMetis if it does not appear in the options of -mat_mumps_icntl_7.In the options I only have Metis and not ParMetis.
>
>
> You need to use -mat_mumps_icntl_28 2 -mat_mumps_icntl_29 2
>
> Barry, I don’t think we can programmatically shut off this warning, it’s guarded by a bunch of KEEP() values, see src/dana_driver.F:4707, which are only settable/gettable by people with access to consortium releases.
> I’ll ask the MUMPS people for confirmation.
> Note that this warning is only printed to screen with the option -mat_mumps_icntl_4 2 (or higher), so this won’t show up for standard runs.
>
> Thanks,
> Pierre
>
>> On 1 Nov 2023, at 5:52 PM, Barry Smith <bsmith at petsc.dev> wrote:
>>
>>
>> Pierre,
>>
>> Could the PETSc MUMPS interface "turn-off" ICNTL(6) in this situation so as to not trigger the confusing warning message from MUMPS?
>>
>> Barry
>>
>>> On Nov 1, 2023, at 12:17 PM, Pierre Jolivet <pierre at joliv.et> wrote:
>>>
>>>
>>>
>>>> On 1 Nov 2023, at 3:33 PM, Zhang, Hong via petsc-users <petsc-users at mcs.anl.gov> wrote:
>>>>
>>>> Victoria,
>>>> "** Maximum transversal (ICNTL(6)) not allowed because matrix is distributed
>>>> Ordering based on METIS"
>>>
>>> This warning is benign and appears for every run using a sequential partitioner in MUMPS with a MATMPIAIJ.
>>> (I’m not saying switching to ParMETIS will not make the issue go away)
>>>
>>> Thanks,
>>> Pierre
>>>
>>> $ ../../../../arch-darwin-c-debug-real/bin/mpirun -n 2 ./ex2 -pc_type lu -mat_mumps_icntl_4 2
>>> Entering DMUMPS 5.6.2 from C interface with JOB, N = 1 56
>>> executing #MPI = 2, without OMP
>>>
>>> =================================================
>>> MUMPS compiled with option -Dmetis
>>> MUMPS compiled with option -Dparmetis
>>> MUMPS compiled with option -Dpord
>>> MUMPS compiled with option -Dptscotch
>>> MUMPS compiled with option -Dscotch
>>> =================================================
>>> L U Solver for unsymmetric matrices
>>> Type of parallelism: Working host
>>>
>>> ****** ANALYSIS STEP ********
>>>
>>> ** Maximum transversal (ICNTL(6)) not allowed because matrix is distributed
>>> Processing a graph of size: 56 with 194 edges
>>> Ordering based on AMF
>>> WARNING: Largest root node of size 26 not selected for parallel execution
>>>
>>> Leaving analysis phase with ...
>>> INFOG(1) = 0
>>> INFOG(2) = 0
>>> […]
>>>
>>>> Try parmetis.
>>>> Hong
>>>> From: petsc-users <petsc-users-bounces at mcs.anl.gov> on behalf of Victoria Rolandi <victoria.rolandi93 at gmail.com>
>>>> Sent: Tuesday, October 31, 2023 10:30 PM
>>>> To: petsc-users at mcs.anl.gov <petsc-users at mcs.anl.gov>
>>>> Subject: [petsc-users] Error using Metis with PETSc installed with MUMPS
>>>>
>>>> Hi,
>>>>
>>>> I'm solving a large sparse linear system in parallel and I am using PETSc with MUMPS. I am trying to test different options, like the ordering of the matrix. Everything works if I use the -mat_mumps_icntl_7 2 or -mat_mumps_icntl_7 0 options (with the first one, AMF, performing better than AMD), however when I test METIS -mat_mumps_icntl_7 5 I get an error (reported at the end of the email).
>>>>
>>>> I have configured PETSc with the following options:
>>>>
>>>> --with-cc=mpiicc --with-cxx=mpiicpc --with-fc=mpiifort --with-scalar-type=complex --with-debugging=0 --with-precision=single --download-mumps --download-scalapack --download-parmetis --download-metis
>>>>
>>>> and the installation didn't give any problems.
>>>>
>>>> Could you help me understand why metis is not working?
>>>>
>>>> Thank you in advance,
>>>> Victoria
>>>>
>>>> Error:
>>>>
>>>> ****** ANALYSIS STEP ********
>>>> ** Maximum transversal (ICNTL(6)) not allowed because matrix is distributed
>>>> Processing a graph of size: 699150 with 69238690 edges
>>>> Ordering based on METIS
>>>> 510522 37081376 [100] [10486 699150]
>>>> Error! Unknown CType: -1
>>>
>>
>
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