[petsc-users] unable to build petsc with cuda / superlu-dist enabled

byron lbgpublic at gmail.com
Thu Aug 25 08:38:22 CDT 2022


Hi Barry

There doesn't appear to be any reference to 'optimize' in the only copy of
superlu_gpu_utils.cu I could find, I've attached a copy.

Thanks



On Thu, Aug 25, 2022 at 1:44 PM Barry Smith <bsmith at petsc.dev> wrote:

>
> nvcc fatal   : redefinition of argument 'optimize'
> make[2]: *** [SRC/CMakeFiles/superlu_dist.dir/build.make:499:
> SRC/CMakeFiles/superlu_dist.dir/superlu_gpu_utils.cu.o] Error 1
> make[2]: *** Waiting for unfinished jobs....
> nvcc fatal   : redefinition of argument 'optimize'
> make[2]: *** [SRC/CMakeFiles/superlu_dist-static.dir/build.make:499:
> SRC/CMakeFiles/superlu_dist-static.dir/superlu_gpu_utils.cu.o] Error 1
> make[2]: *** Waiting for unfinished jobs....
>
> It seems that nvcc is unhappy with something in superlu_gpu_utils.cu
>  Could you check that file for any "redefinition of optimize"?
> Unfortunately the nvcc compiler isn't kind enough to print the line number
> of the redefinition or that information is lost somehow in the build
> process.
>
> Barry
>
> On Aug 25, 2022, at 6:50 AM, byron <lbgpublic at gmail.com> wrote:
>
> Hi All
>
> I am having trouble getting petsc to build with cuda / superlu-dist
> enabled.  I have been trying to build it as part of another software tool,
> moose, hence the choice of options being passed to configure
>
> python3 ./configure --download-hypre=1 \
> --with-shared-libraries=1 \
> --download-hdf5=1 \
> --download-hdf5-fortran-bindings=0 \
> --with-debugging=no \
> --download-fblaslapack=1 \
> --download-metis=1 \
> --download-ptscotch=1 \
> --download-parmetis=1 \
> --download-superlu_dist=1 \
> --download-mumps=1 \
> --download-strumpack=1 \
> --download-scalapack=1 \
> --download-slepc=1 \
> --with-mpi=1 \
> --with-openmp=1 \
> --with-cxx-dialect=C++11 \
> --with-fortran-bindings=0 \
> --with-sowing=0 \
> --with-64-bit-indices \
> --with-cuda \
> --prefix=/home/blah/blah
>
> it fails with
>
> =============================================================================================
>
>                                 Installing PTScotch; this may take several
> minutes
>
>  =============================================================================================
>
>
> =============================================================================================
>
>                                 Trying to download git://
> https://github.com/xiaoyeli/superlu_dist for SUPERLU_DIST
>
>
>  =============================================================================================
>
>
> =============================================================================================
>
>                                 Configuring SUPERLU_DIST with cmake; this
> may take several minutes
>
>  =============================================================================================
>
>
> =============================================================================================
>
>                                 Compiling and installing SUPERLU_DIST; this
> may take several minutes
>
>  =============================================================================================
>
>
> *******************************************************************************
>          UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for
> details):
>
> -------------------------------------------------------------------------------
> Error running make on  SUPERLU_DIST
>
> *******************************************************************************
>
> I've attached the configure.log.
>
> I've tried a few different things but nothing that resulted in a
> successfull build.  The most promising was I tried to build superlu_dist
> separately with the configure options that petsc passes it and then kept
> trying the build over and over droping out different configure options
> until I got it to work.  In that case removing a "-std=c++14" entry
> appeared to fix the problem but then when I made the same change in how
> petsc builds superlu-dist the make failed on superlu-dist with a different
> error.  I get the feeling I'm dealing with symptoms of the problem rather
> than the cause.
>
> Thanks
> Byron
>
>
>
>
> <configure.log>
>
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.mcs.anl.gov/pipermail/petsc-users/attachments/20220825/5b80d419/attachment-0001.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: superlu_gpu_utils.cu
Type: application/octet-stream
Size: 2166 bytes
Desc: not available
URL: <http://lists.mcs.anl.gov/pipermail/petsc-users/attachments/20220825/5b80d419/attachment-0001.obj>


More information about the petsc-users mailing list