[petsc-users] aijcusparse error
Mark Adams
mfadams at lbl.gov
Wed Jun 9 09:25:33 CDT 2021
On Wed, Jun 9, 2021 at 1:40 AM Barry Smith <bsmith at petsc.dev> wrote:
>
> You need to set the type before calling the preallocation routines.
> Otherwise when you set to a new type all the previous information is
> essentially removed when the new type is created.
>
I do * set the type b*efore calling the *preallocation routines*
>
> Barry
>
> A slightly more clever MatCreate_MPIAIJCUSPARSE() could check if the
> matrix was already of the type MPIAIJ and reuse that information but
> currently it does not do that check.
>
>
> On Jun 8, 2021, at 11:11 PM, Mark Adams <mfadams at lbl.gov> wrote:
>
> I have an old code that fails with -mat_type aijcusparse
> This is the code that creates the matrix:
>
> ierr = PetscPrintf(PETSC_COMM_SELF,"\nPetscSolve.H MatCreate adding
> csr \n");CHKERRQ(ierr);
> ierr = MatCreate(wcomm,&m_mat);CHKERRQ(ierr);
> ierr = MatSetOptionsPrefix(m_mat,"csr_");CHKERRQ(ierr); // prefix
> is new but does not matter
> ierr =
> MatSetSizes(m_mat,NN,NN,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
> ierr = MatSetBlockSize(m_mat,nc);CHKERRQ(ierr);
>
> * ierr = MatSetType(m_mat,MATAIJ);CHKERRQ(ierr);*
> * ierr = MatSeqAIJSetPreallocation(m_mat,nnzrow,
> d_nnz);CHKERRQ(ierr); ierr = MatMPIAIJSetPreallocation(m_mat,nnzrow,
> d_nnz, nnzrow/2, o_nnz);CHKERRQ(ierr);*
> ierr =
> MatSetOption(m_mat,MAT_NEW_NONZERO_ALLOCATION_ERR,PETSC_FALSE)
> ;CHKERRQ(ierr);
> ierr = MatSetFromOptions( m_mat ); CHKERRQ(ierr);
>
> With -csr_mat_type aijcusprase I get this output.
> Note, this apparent recursive structure in the call stack. I have no idea
> where that is coming from. I can't see that from the code.
>
> Any ideas?
>
> Thanks,
> Mark
>
> PetscSolve.H MatCreate .H adding csr
> [0]PETSC ERROR: --------------------- Error Message
> --------------------------------------------------------------
> [0]PETSC ERROR: Object is in wrong state
> [0]PETSC ERROR: Must call MatXXXSetPreallocation(), MatSetUp() or the
> matrix has not yet been factored on argument 1 "mat" before MatSetValues()
> [0]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html
> for trouble shooting.
> [0]PETSC ERROR: Petsc Development GIT revision: v3.15.0-734-gc2c1a54 GIT
> Date: 2021-06-07 02:44:02 +0000
> [0]PETSC ERROR: ../viscousDriver3d.Linux.64.mpiCC.mpifort.OPT.MPI.PETSC.ex
> on a arch-summit-dbg-gnu-cuda named a15n03 by adams Tue Jun 8 23:39:49 2021
> [0]PETSC ERROR: Configure options --with-fc=mpifort --with-cc=mpicc
> --with-cxx=mpiCC --CFLAGS="-fPIC -g -mcpu=native
> -Wno-unused-but-set-variable -Wno-long-long -Wno-sign-compare
> -Wno-deprecated -Wno-unused-local-typedefs -Wno-variadic-macros
> -Wno-unknown-pragmas" --CXXFLAGS="-fPIC -g -std=c++11 -mcpu=native
> -Wno-unused-but-set-variable -Wno-long-long -Wno-sign-compare
> -Wno-deprecated -ftemplate-depth-99 -Wno-unused-local-typedefs
> -Wno-literal-suffix -Wno-invalid-offsetof -Wno-variadic-macros
> -Wno-unknown-pragmas" --CUDAFLAGS="-g -Xcompiler -lineinfo"
> --FCFLAGS="-fPIC -g" --FCOPTFLAGS=-O0 --COPTFLAGS=-O0 --CXXOPTFLAGS=-O0
> --with-ssl=0 --with-batch=0 --with-mpiexec="jsrun -g1" --with-cuda=1
> --with-cudac=nvcc --with-cuda-gencodearch=70 --download-metis
> --download-parmetis
> --with-blaslapack-lib="-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-6.4.0/netlib-lapack-3.8.0-wcabdyqhdi5rooxbkqa6x5d7hxyxwdkm/lib64
> -lblas -llapack" --with-x=0 --with-64-bit-indices=0 --with-debugging=1
> PETSC_ARCH=arch-summit-dbg-gnu-cuda --force
> [0]PETSC ERROR: #1 MatSetValues() at
> /gpfs/alpine/csc314/scratch/adams/petsc/src/mat/interface/matrix.c:1366
> [0]PETSC ERROR: #2 formMatrix() at
> ../srcLib/EBPetscLinearSolverPoisson.cpp:126
> [0]PETSC ERROR: #3 setup_solver() at
> ../../../Chombo/lib/src/AMRElliptic/PetscSolverI.H:283
> [0]PETSC ERROR: #4 solve_private() at
> ../../../Chombo/lib/src/AMRElliptic/PetscSolverI.H:427
> [0]PETSC ERROR: #5 KSPSolve() at
> /gpfs/alpine/csc314/scratch/adams/petsc/src/ksp/ksp/interface/itfunc.c:1080
> [0]PETSC ERROR: #6 solve_private() at
> ../../../Chombo/lib/src/AMRElliptic/PetscSolverI.H:508
> [0]PETSC ERROR: #7 KSPSolve() at
> /gpfs/alpine/csc314/scratch/adams/petsc/src/ksp/ksp/interface/itfunc.c:1080
> [0]PETSC ERROR: #8 solve_private() at
> ../../../Chombo/lib/src/AMRElliptic/PetscSolverI.H:508
> [0]PETSC ERROR: #9 KSPSolve() at
> /gpfs/alpine/csc314/scratch/adams/petsc/src/ksp/ksp/interface/itfunc.c:1080
> [0]PETSC ERROR: #10 solve_private() at
> ../../../Chombo/lib/src/AMRElliptic/PetscSolverI.H:508
> [0]PETSC ERROR: #11 KSPSolve() at
> /gpfs/alpine/csc314/scratch/adams/petsc/src/ksp/ksp/interface/itfunc.c:1080
> [0]PETSC ERROR: #12 solve_private() at
> ../../../Chombo/lib/src/AMRElliptic/PetscSolverI.H:508
>
>
>
>
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