[petsc-users] Petsc not work in Windows-10
Qin Lu
lu_qin_2000 at yahoo.com
Mon Mar 30 15:43:27 CDT 2020
Hi Satish,
The ex2.exe works with "mpiexec -np 2" when I ran it from command line. Then I ran "which mpiexec", it actually points to Intel-MPI instead of MPICH2, probably because I have set the former's path in environment variable PATH in Win-10. I will try to reinstall Intel-MPI and build Petsc with Intel-MPI.
As for the crash of calling to KSPSetPCSide(ksp_solver,PC_RIGHT,ierr) in my Fortran-90 program, do you have any idea what can be wrong? Can it be related to MPI?
I tested config/examples/arch-ci-mswin-intel.py as you suggested, but got the following output:
============python ./arch-ci-mswin-intel.pyTraceback (most recent call last): File "./arch-ci-mswin-intel.py", line 10, in <module> import configureImportError: No module named configure============
Thanks,Qin
I will try to use Intel-MPI and see what will happen.
Thanks,Qin
On Monday, March 30, 2020, 01:47:49 PM CDT, Satish Balay <balay at mcs.anl.gov> wrote:
Please preserve cc: to the list
> shared libraries: disabled
So PETSc is correctly built as static.
> > C:/Program Files/mpich2x64/bin/mpiexec.exe: error while loading shared libraries: ?: cannot open shared object file: No such file or directory
So its not clear which shared library this error is referring to. But then - this error was with petsc-3.4.2
You can always try to run the code manually without mpiexec - and see if that works.
cd src/ksp/ksp/examples/tutorials
make ex2
./ex2
Wrt MSMPI - yes its free to download
And PETSc does work with Intel-MPI. It might be a separate download/install. [so I can't say if what you have is the correct install of IntelMPI or not]
Check the builds we use for testing - for ex: config/examples/arch-ci-mswin-*.py
Satish
On Mon, 30 Mar 2020, Qin Lu wrote:
> Hi Satish,
> The configure.log and RDict.log of Petsc-3.12.4 build is attached.
> Is the MSMPI free to use in Windows-10?
> Does Petsc support Intel-MPI? I have it in my machine, but for some reason I only find the /mpi/intel64/bin, but not /mpi/intel64/include subdirectory of it.
> Thanks a lot for your help.Qin
> On Monday, March 30, 2020, 12:26:09 PM CDT, Satish Balay <balay at mcs.anl.gov> wrote:
>
> MPICH is unsupported - and we haven't tested with it for a long time.
>
> And petsc-3.4.2 is from 2013 - and untested with current gen os/compilers/libraries.
>
> Can you send logs from Petsc-3.12.4 build [or try latest Petsc-3.13.0]?
>
> We recommend 64bit MSMPI for windows.
>
> Satish
>
> On Mon, 30 Mar 2020, Qin Lu via petsc-users wrote:
>
> > Hello,
> > I am trying to build Petsc-3.4.2 in my Windows-10 workstation using Cygwin, with Intel-2018 compilers and MKL, and MPICH2. The configuration/compilation/installation seem to finish without problem, but test program (ex19) failed since it could not find a shared lib. Then I linked the libpetsc.lib with my program (in Fortran-90), but it got run time crash when it calls KSPSetPCSide(ksp_solver,PC_RIGHT,ierr) or other Petsc subroutines. Note that this package was built, tested and worked well with the same Fortran-90 program in my Windows-7 workstation.
> >
> > Also tried Petsc-3.12.4 but got the same errors.
> >
> > The following is my configuration:
> >
> >
> > ===============
> >
> > ./configure --with-cc='win32fe icl' --with-fc='win32fe ifort' --with-cxx='win32fe icl' --with-petsc-arch="arch-win64-release" --prefix=/cygdrive/c/cygwin_cache/petsc-3.4.2-release-win-64bit --with-blas-lapack-dir="/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/mkl/lib/intel64" --with-mpi-dir="/cygdrive/c/Program Files/mpich2x64" --with-debugging=0 --useThreads=0 --with-x=0 --with-x11=0 --with-xt=0 --with-shared-libraries=0
> >
> > ===============
> >
> >
> > The error message of running ex19 is:
> >
> >
> > =================
> >
> > $ make PETSC_DIR=/cygdrive/c/cygwin_cache/petsc-3.4.2-debug-win-64bit test
> >
> > Running test examples to verify correct installation
> >
> > Using PETSC_DIR=/cygdrive/c/cygwin_cache/petsc-3.4.2-debug-win-64bit and PETSC_ARCH=arch-win64-debug
> >
> > Possible error running C/C++ src/snes/examples/tutorials/ex19 with 1 MPI process
> >
> > See http://www.mcs.anl.gov/petsc/documentation/faq.html
> >
> > C:/Program Files/mpich2x64/bin/mpiexec.exe: error while loading shared libraries: ?: cannot open shared object file: No such file or directory
> >
> > =================
> >
> >
> > Thanks a lot for any suggestions.
> >
> >
> > Best Regards,
> >
> > Qin
> >
> >
> >
> >
> >
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