[petsc-users] Petsc configure error (cmake)

[Eda Oktay]

Dear Barry,

I am afraid I am still getting the same error.

Thanks,

Eda

Barry Smith <bsmith at petsc.dev>, 29 Tem 2020 Çar, 18:51 tarihinde şunu yazdı:
>
>
>   Please try
>
>   rm -rf  /home/eda/petsc-3.13.2/arch-linux-c-debug
>
>   and then run configure again.
>
>   It lists the correct make to use
>
> Makefile processor on this system is: /home/eda/petsc-3.13.2/arch-linux-c-debug/bin/make
>
>   So I am hoping the problem is from the crazy cmake caching nonsense and cleaning out the old files will resolve the problem.
>
>   Barry
>
>
> > On Jul 29, 2020, at 5:51 AM, Eda Oktay <eda.oktay at metu.edu.tr> wrote:
> >
> > Dear Barry,
> >
> > I wrote the followings:
> >
> > $ patch -p1 < cmakemake.patch
> >
> > And it gave the following line:
> >
> > (Stripping trailing CRs from patch; use --binary to disable.)
> > patching file config/BuildSystem/config/packages/cmake.py
> >
> > Then I configured as follows:
> >
> > ./configure --with-cc=gcc --with-cxx=g++ --with-fc=gfortran
> > --download-make --download-mpich --download-openblas --download-metis
> > --download-parmetis --download-chaco
> > --download-slepc=/home/eda/slepc-v3.13.2.tar.gz --download-cmake
> > --with-X=1
> >
> > But I am still getting the following error:
> >
> > *******************************************************************************
> >         UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log
> > for details):
> > -------------------------------------------------------------------------------
> > Error running configure on CMAKE
> > *******************************************************************************
> >
> > Am I doing something wrong?
> >
> > Thanks!
> >
> > Eda
> >
> > Barry Smith <bsmith at petsc.dev>, 29 Tem 2020 Çar, 00:10 tarihinde şunu yazdı:
> >>
> >>
> >>   It's better to use git than download tarballs. With tarballs it is not possible to access recent fixes or try branches.
> >>
> >>   Here is what you can do, save the attachment as cmakemake.patch and do
> >>
> >>   patch -p1 < cmakemake.patch
> >>
> >>   in the PETSc directory
> >>
> >>   Then run configure as before
> >>
> >>   Barry
> >>
> >>
> >>
> >>> On Jul 28, 2020, at 3:28 PM, Eda Oktay <eda.oktay at metu.edu.tr> wrote:
> >>>
> >>> Dear Barry,
> >>>
> >>> Thank you so much for answering. So, I downloaded the tar.gz file and
> >>> now, should I configure this file with my previous options?  I am
> >>> using the following line:
> >>>
> >>> ./configure --with-cc=gcc --with-cxx=g++ --with-fc=gfortran
> >>> --download-make --download-mpich --download-openblas --download-metis
> >>> --download-parmetis --download-chaco
> >>> --download-slepc=/home/eda/slepc-v3.13.2.tar.gz --download-cmake
> >>> --with-X=1
> >>>
> >>> Thanks so much again!
> >>>
> >>> Eda
> >>>
> >>> Barry Smith <bsmith at petsc.dev>, 28 Tem 2020 Sal, 20:55 tarihinde şunu yazdı:
> >>>>
> >>>>
> >>>>  Eda,
> >>>>
> >>>>    The branch barry/2020-07-28/cmake-use-make-if-given/maint should resolve the problem. It will force the cmake build to use the make obtained with --download-make
> >>>>
> >>>>  Barry
> >>>>
> >>>>
> >>>> On Jul 28, 2020, at 9:48 AM, Matthew Knepley <knepley at gmail.com> wrote:
> >>>>
> >>>> On Tue, Jul 28, 2020 at 10:45 AM Eda Oktay <eda.oktay at metu.edu.tr> wrote:
> >>>>>
> >>>>> I am trying to download Petsc with slepc,openblas,mpich,meti,parmetis
> >>>>> and chaco to a linux computer (probably
> >>>>> ubuntu, I don't know because I am using it via ssh).
> >>>>>
> >>>>> Due to an error, for metis, I needed to download cmake, so I added
> >>>>> this option, too. However, I got an error telling me that "Error
> >>>>> running configure on cmake". I attached configure.log.
> >>>>>
> >>>>> What should I do? Where is the problem and how can ı fix it?
> >>>>>
> >>>>> Thank you so much for answering,
> >>>>
> >>>>
> >>>> It looks like you do not have 'make' in your path, and CMake is feaking out:
> >>>>
> >>>> CMAKE was just downloaded, forcing a rebuild because cannot determine if package has changed
> >>>>                       ===============================================================================
> >>>>                             Running configure on CMAKE; this may take several minutes
> >>>>                       ===============================================================================
> >>>>
> >>>> Running Executable WITHOUT threads to time it out
> >>>> Executing: ./configure --prefix=/home/eda/petsc-3.13.2/arch-linux-c-debug --parallel=40
> >>>> stdout:
> >>>> ---------------------------------------------
> >>>> CMake 3.15.6, Copyright 2000-2019 Kitware, Inc. and Contributors
> >>>> Found GNU toolchain
> >>>> C compiler on this system is: gcc
> >>>> C++ compiler on this system is: g++
> >>>> ---------------------------------------------
> >>>> Error when bootstrapping CMake:
> >>>> Cannot find appropriate Makefile processor on this system.
> >>>> Please specify one using environment variable MAKE.
> >>>> ---------------------------------------------
> >>>> Log of errors: /home/eda/petsc-3.13.2/arch-linux-c-debug/externalpackages/cmake-3.15.6/Bootstrap.cmk/cmake_bootstrap.log
> >>>> ---------------------------------------------
> >>>>
> >>>> Thanks,
> >>>>
> >>>>   Matt
> >>>>
> >>>>>
> >>>>> Eda
> >>>>
> >>>>
> >>>>
> >>>> --
> >>>> What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.
> >>>> -- Norbert Wiener
> >>>>
> >>>> https://www.cse.buffalo.edu/~knepley/
> >>>>
> >>>>
> >>
> > <configure.log>
>
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