[petsc-users] configure error

Mark Adams mfadams at lbl.gov
Wed Jul 15 11:14:21 CDT 2020


Thanks,

Inexplicably, it says the project software directories are read-only on KNL
(compute) nodes on Cori, which does not make sense to me, but maybe it's
just my permissions.

I can build on the login nodes with-batch=0 now. I guess that got fixed
(executing a program) or maybe Hypre was installed already.

On Wed, Jul 15, 2020 at 12:28 AM Satish Balay <balay at mcs.anl.gov> wrote:

> Configure Options: --configModules=PETSc.Configure
> --optionsModule=config.compilerOptions --with-cc=cc --with-cxx=CC
> --with-fc=ftn COPTFLAGS="  -g -O2" CXXOPTFLAGS="-g -O2" FOPTFLAGS="  -g
> -O2" --download-fblaslapack=1 --download-hypre=0 --download-metis=1
> --download-parmetis=1 --with-debugging=0 --with-mpiexec=srun --with-batch=1
> --known-mpi-shared-libraries=1 --with-x=0 --with-hwloc=0
> --with-64-bit-indices=1 PETSC_ARCH=arch-cori-knl-opt-intel --with-openmp=0
> --download-p4est=0
> --prefix=/global/common/software/m1041/petsc_install/petsc_knl_intel
> PETSC_DIR=/global/homes/m/madams/petsc_install/petsc
>
>
>
> ===============================================================================
>                                 You do not have write permissions to the
> --prefix directory
> /global/common/software/m1041/petsc_install/petsc_knl_intel
>                                 You will be prompted for the sudo password
> for any external package installs
>
> ===============================================================================
>
>
> Satish
>
>
> On Wed, 15 Jul 2020, Mark Adams wrote:
>
> > This workflow worked, but I now get this error. KNL + Intel at NERSC.
> >
> > It's a METIS problem. cmake has been an issue in the past.
> >
> > nid02470 maint= ~/petsc_install/petsc$ cmake --version
> > cmake version 3.14.4
> >
>
>
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