[petsc-users] deactivating x11 in PETSc 3.13.0 with pastix/hwloc

[Matthew Knepley]

Hmm, there is no sign of libX11 in that log. Can you send me

  $PETSC_DIR/$PETSC_ARCH/lib/petsc/conf/petscvariables

  Thanks,

     Matt

On Mon, Apr 6, 2020 at 1:02 PM Alfredo Jaramillo <ajaramillopalma at gmail.com>
wrote:

> Sure, here it is.
> thx
>
> On Mon, Apr 6, 2020 at 1:59 PM Matthew Knepley <knepley at gmail.com> wrote:
>
>> On Mon, Apr 6, 2020 at 12:55 PM Alfredo Jaramillo <
>> ajaramillopalma at gmail.com> wrote:
>>
>>> hello everyone,
>>>
>>> I have a fresh installation of the 3.13.0 version with pastix. Like with
>>> previous versions, I'm using the options
>>>
>>> --with-x11=0 --with-x=0 --with-windows-graphics=0
>>>
>>> to disable X11
>>>
>>> however, when compiling my program foo and doing
>>>
>>> $ ldd foo
>>>
>>> between the linked libraries there appear:
>>> libXNVCtrl.so.0 and libX11.so.6
>>>
>>> the first one related to NVIDIA. I observed that this does not happen
>>> when installing PETSc without hwloc. In this new version, PETSc requires to
>>> install hwloc when trying to install pastix. In previous versions of PETSc
>>> (eg 3.11.2) that wasn't necessary.
>>>
>>> I'm working in a cluster where I have no access to these X11-related
>>> libraries and that's why I need them not be linked. Is it there some way to
>>> disable X11 when installing hwloc? maybe enforcing some configuration
>>> variables when installing it through petsc or installing it independently?
>>>
>>
>> Can you send configure.log?
>>
>>   Thanks,
>>
>>      Matt
>>
>>
>>> thanks a lot!
>>>
>>> Below the configuration command of the two installations I've tried with
>>> the 3.13.0 version.
>>>
>>> =================== WITH PASTIX ===================
>>>
>>> ./configure --with-make-np=20
>>> --with-petsc-arch=x64go-3.13-openmpi-4.0.1-pastix-64 --with-debugging=0
>>> --doCleanup=0 \
>>> --with-mpi=1 \
>>> --with-valgrind=1 --with-valgrind-dir=$PATH_TO_VALGRIND/valgrind-3.15.0 \
>>> --download-scalapack \
>>> --download-openblas \
>>> --download-mumps \
>>> --download-superlu_dist \
>>> --download-metis \
>>> --download-parmetis \
>>> --download-ptscotch \
>>> --download-hypre \
>>>
>>> *--download-pastix \--download-hwloc \*
>>> --with-64-bit-indices=1 \
>>> LDFLAGS=$LDFLAGS CPPFLAGS=$CPPFLAGS \
>>> --with-cxx-dialect=C++11 \
>>> --with-x11=0 --with-x=0 --with-windows-graphics=0 \
>>> COPTFLAGS="-O3 -march=native -mtune=native" \
>>> CXXOPTFLAGS="-O3 -march=native -mtune=native" \
>>> FOPTFLAGS="-O3 -march=native -mtune=native"
>>>
>>> =================== WITHOUT PASTIX ===================
>>>
>>> the same as above but the options "--download-pastix --download-hwloc"
>>>
>>> ======================================================
>>>
>>>
>>
>> --
>> What most experimenters take for granted before they begin their
>> experiments is infinitely more interesting than any results to which their
>> experiments lead.
>> -- Norbert Wiener
>>
>> https://www.cse.buffalo.edu/~knepley/
>> <http://www.cse.buffalo.edu/~knepley/>
>>
>

-- 
What most experimenters take for granted before they begin their
experiments is infinitely more interesting than any results to which their
experiments lead.
-- Norbert Wiener

https://www.cse.buffalo.edu/~knepley/ <http://www.cse.buffalo.edu/~knepley/>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.mcs.anl.gov/pipermail/petsc-users/attachments/20200406/d2a006e9/attachment.html>