[petsc-users] 3.11 configure error on pleiades

[Balay, Satish]

Hm - with-mpi-exec is wrong and ignored - but configure should default to 'mpiexec' from PATH anyway.

It would be good to check configure.log for details on this error.

Satish

On Sat, 30 Mar 2019, Matthew Knepley via petsc-users wrote:

> On Sat, Mar 30, 2019 at 4:31 PM Kokron, Daniel S. (ARC-606.2)[InuTeq, LLC]
> via petsc-users <petsc-users at mcs.anl.gov> wrote:
> 
> > Last time I built PETSc on Pleiades it was version 3.8.3.  Using the same
> > build procedure with the same compilers and MPI libraries with 3.11 does
> > not work.  Is there a way to enable more verbose diagnostics during the
> > configure phase so I can figure out what executable was being run and how
> > it was compiled?
> >
> 
> This is not the right option:
> 
>   --with-mpi-exec=mpiexec
> 
> it is
> 
>   --with-mpiexec=mpiexec
> 
>   Thanks,
> 
>       Matt
> 
> PBS r147i6n10 24> ./configure --prefix=/nobackupp8/XXX
> > /Projects/CHEM/BoA_Case/Codes-2018.3.222/binaries/petsc-3.11+
> > --with-debugging=0 --with-shared-libraries=1 --with-cc=mpicc
> > --with-fc=mpif90 --with-cxx=mpicxx
> > --with-blas-lapack-dir=$MKLROOT/lib/intel64
> > --with-scalapack-include=$MKLROOT/include
> > --with-scalapack-lib="$MKLROOT/lib/intel64/libmkl_scalapack_lp64.so
> > $MKLROOT/lib/intel64/libmkl_blacs_sgimpt_lp64.so" --with-cpp=/usr/bin/cpp
> > --with-gnu-compilers=0 --with-vendor-compilers=intel -COPTFLAGS="-g -O3
> > -xCORE-AVX2 -diag-disable=cpu-dispatch" -CXXOPTFLAGS="-g -O3 -xCORE-AVX2
> > -diag-disable=cpu-dispatch" -FOPTFLAGS="-g -O3 -xCORE-AVX2
> > -diag-disable=cpu-dispatch" --with-mpi=true --with-mpi-exec=mpiexec
> > --with-mpi-compilers=1 --with-precision=double --with-scalar-type=real
> > --with-x=0 --with-x11=0 --with-memalign=32
> >
> >
> >
> > I get this which usually means that an executable was linked with libmpi,
> > but was not launched with mpiexec.
> >
> >
> >
> > TESTING: configureMPITypes from
> > config.packages.MPI(/nobackupp8/dkokron/Projects/CHEM/BoA_Case/Codes-2018.3.222/petsc/config/BuildSystem/config/packages/MPI.py:283)
> >
> > ????????CMPT ERROR: mpiexec_mpt must be used to launch all MPI applications
> >
> > ????????CMPT ERROR: mpiexec_mpt must be used to launch all MPI applications
> >
> > ????????CMPT ERROR: mpiexec_mpt must be used to launch all MPI applications
> >
> >
> >
> > If I let it continue, configure reports that MPI is empty.
> >
> >
> >
> > make:
> >
> > BLAS/LAPACK:
> > -Wl,-rpath,/nasa/intel/Compiler/2018.3.222/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64
> > -L/nasa/intel/Compiler/2018.3.222/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64
> > -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread
> >
> > MPI:
> >
> > cmake:
> >
> > pthread:
> >
> > scalapack:
> >
> >
> >
> > Daniel Kokron
> > Redline Performance Solutions
> > SciCon/APP group
> >
> > --
> >
> >
> >
> 
> 
>