[petsc-users] VecCopy fails after VecDuplicate

[Sajid Ali]

As requested :

[sajid at xrm free_space]$ ./ex_modify
Solving a linear TS problem on 1 processor
m : 256, slices : 1000.000000, lambda : 1.239800e-10
[0]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[0]PETSC ERROR: Object is in wrong state
[0]PETSC ERROR: Not for unassembled vector
[0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for
trouble shooting.
[0]PETSC ERROR: Petsc Development GIT revision:
0cd88d33dca7e1f18a10cbb6fcb08f83d068c5f4  GIT Date: 2019-01-06 13:27:26
-0600
[0]PETSC ERROR: ./ex_modify on a  named xrm by sajid Thu Jan 17 13:29:12
2019
[0]PETSC ERROR: Configure options
--prefix=/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/petsc-develop-2u6vuwagkoczyvnpsubzrubmtmpfhhkj
--with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0
CFLAGS= FFLAGS= CXXFLAGS=
--with-cc=/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/mpich-3.3-z5uiwmx24jylnivuhlnqjjmm674ozj6x/bin/mpicc
--with-cxx=/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/mpich-3.3-z5uiwmx24jylnivuhlnqjjmm674ozj6x/bin/mpic++
--with-fc=/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/mpich-3.3-z5uiwmx24jylnivuhlnqjjmm674ozj6x/bin/mpif90
--with-precision=double --with-scalar-type=complex
--with-shared-libraries=1 --with-debugging=1 --with-64-bit-indices=0
--with-debugging=%s
--with-blaslapack-lib="/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/intel-mkl-2019.0.117-wzqlcijwx7odz2x5chembudo5leqpfh2/compilers_and_libraries_2019.0.117/linux/mkl/lib/intel64/libmkl_intel_lp64.so
/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/intel-mkl-2019.0.117-wzqlcijwx7odz2x5chembudo5leqpfh2/compilers_and_libraries_2019.0.117/linux/mkl/lib/intel64/libmkl_sequential.so
/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/intel-mkl-2019.0.117-wzqlcijwx7odz2x5chembudo5leqpfh2/compilers_and_libraries_2019.0.117/linux/mkl/lib/intel64/libmkl_core.so
/lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-x=1
--with-clanguage=C --with-scalapack=0 --with-metis=1
--with-metis-dir=/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/metis-5.1.0-nhgzn4kjskctzmzv35mstvd34nj2ugek
--with-hdf5=1
--with-hdf5-dir=/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/hdf5-1.10.4-ltstvsxvyjue2gxfegi4nvr6c5xg3zww
--with-hypre=0 --with-parmetis=1
--with-parmetis-dir=/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/parmetis-4.0.3-hw3j2ss7mjsc5x5f2gaflirnuufzptil
--with-mumps=0 --with-trilinos=0 --with-cxx-dialect=C++11
--with-superlu_dist-include=/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/superlu-dist-develop-cpspq4ca2hnyvhx4mz7zsupbj3do6md3/include
--with-superlu_dist-lib=/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/superlu-dist-develop-cpspq4ca2hnyvhx4mz7zsupbj3do6md3/lib/libsuperlu_dist.a
--with-superlu_dist=1 --with-suitesparse=0
--with-zlib-include=/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/zlib-1.2.11-ldu43taplg2nbkxtem346zq4ibhad64i/include
--with-zlib-lib="-L/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/zlib-1.2.11-ldu43taplg2nbkxtem346zq4ibhad64i/lib
-lz" --with-zlib=1
[0]PETSC ERROR: #1 VecCopy() line 1571 in
/tmp/sajid/spack-stage/spack-stage-nwxY3Q/petsc/src/vec/vec/interface/vector.c
[0]PETSC ERROR: #2 Monitor() line 296 in
/raid/home/sajid/packages/xwp_petsc/1d/free_space/ex_modify.c
[0]PETSC ERROR: #3 TSMonitor() line 3929 in
/tmp/sajid/spack-stage/spack-stage-nwxY3Q/petsc/src/ts/interface/ts.c
[0]PETSC ERROR: #4 TSSolve() line 3843 in
/tmp/sajid/spack-stage/spack-stage-nwxY3Q/petsc/src/ts/interface/ts.c
[0]PETSC ERROR: #5 main() line 188 in
/raid/home/sajid/packages/xwp_petsc/1d/free_space/ex_modify.c
[0]PETSC ERROR: No PETSc Option Table entries
[0]PETSC ERROR: ----------------End of Error Message -------send entire
error message to petsc-maint at mcs.anl.gov----------
application called MPI_Abort(MPI_COMM_WORLD, 73) - process 0
[unset]: write_line error; fd=-1 buf=:cmd=abort exitcode=73
:
system msg for write_line failure : Bad file descriptor
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