[petsc-users] PETSc configure error

Yaqi Wang yaqiwang at gmail.com
Thu Jan 10 15:14:53 CST 2019


Satish,

Yes, indeed. I figured my bfort is somehow corrupted. 'otool -L' shows that
it is pointing to an non-existing MPI library. Using install_name_tool on
bfort fixed the problem.

Best,
Yaqi

On Thu, Jan 10, 2019 at 1:54 PM Balay, Satish <balay at mcs.anl.gov> wrote:

> Can you send configure.log from this failure?
>
> Do you have any old version of bfort in your PATH?
>
> Satish
>
> On Thu, 10 Jan 2019, Yaqi Wang via petsc-users wrote:
>
> > Hello,
> >
> > I am having difficulty on configuring PETSc. Running configure crashed in
> > the middle. At the end of configure.log, I have
> > ---------------
> >
> >
> *******************************************************************************
> >
> >         CONFIGURATION CRASH  (Please send configure.log to
> > petsc-maint at mcs.anl.gov)
> >
> >
> *******************************************************************************
> >
> > 'NoneType' object has no attribute 'group'  File "./config/configure.py",
> > line 394, in petsc_configure
> >
> >     framework.configure(out = sys.stdout)
> >
> >   File
> >
> "/Users/wangy2/projects/moose/petsc/config/BuildSystem/config/framework.py",
> > line 1092, in configure
> >
> >     self.processChildren()
> >
> >   File
> >
> "/Users/wangy2/projects/moose/petsc/config/BuildSystem/config/framework.py",
> > line 1081, in processChildren
> >
> >     self.serialEvaluation(self.childGraph)
> >
> >   File
> >
> "/Users/wangy2/projects/moose/petsc/config/BuildSystem/config/framework.py",
> > line 1062, in serialEvaluation
> >
> >     child.configure()
> >
> >   File
> >
> "/Users/wangy2/projects/moose/petsc/config/BuildSystem/config/packages/sowing.py",
> > line 119, in configure
> >
> >     self.checkBfortVersion(1,1,25)
> >
> >   File
> >
> "/Users/wangy2/projects/moose/petsc/config/BuildSystem/config/packages/sowing.py",
> > line 59, in checkBfortVersion
> >
> >     major    = int(ver.group(1))
> >
> >
> ================================================================================
> >
> > Finishing configure run at Thu, 10 Jan 2019 13:04:21 -0700
> >
> >
> ================================================================================
> >
> > ----------
> >
> > Does anyone have the similar error before? How should I fix it?
> >
> >
> > Your help is appreciated.
> >
> >
> > Best,
> >
> > Yaqi
> >
>
>
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