[petsc-users] Compiling problem after upgrading to PETSc 3.8.3
TAY Wee Beng
tsltaywb at nus.edu.sg
Tue Feb 20 01:56:07 CST 2018
Hi,
I was previously using PETSc 3.7.6 on different clusters with both Intel
Fortran and GNU Fortran. After upgrading, I met some problems when
trying to compile:
On Intel Fortran:
Previously, I was using:
#include "petsc/finclude/petsc.h90"
in *.F90 when requires the use of PETSc
I read in the change log that h90 is no longer there and so I replaced
with #include "petsc/finclude/petsc.h"
It worked. But I also have some *.F90 which do not use PETSc. However,
they use some modules which uses PETSc.
Now I can't compile them. The error is :
math_routine.f90(3): error #7002: Error in opening the compiled module
file. Check INCLUDE paths. [PETSC]
use mpi_subroutines
mpi_subroutines is a module which uses PETSc, and it compiled w/o problem.
The solution is that I have to compile e.g. math_routine.F90 as if they
use PETSc, by including PETSc include and lib files.
May I know why this is so? It was not necessary before.
Anyway, it managed to compile until it reached hypre.F90.
Previously, due to some bugs, I have to compile hypre with the -r8
option. Also, I have to use:
integer(8) mpi_comm
mpi_comm = MPI_COMM_WORLD
to make my codes work with HYPRE.
But now, compiling gives the error:
hypre.F90(11): error #6401: The attributes of this name conflict with
those made accessible by a USE statement. [MPI_COMM]
integer(8) mpi_comm
--------------------------------------^
hypre.F90(84): error #6478: A type-name must not be used as a
variable. [MPI_COMM]
mpi_comm = MPI_COMM_WORLD
----^
hypre.F90(84): error #6303: The assignment operation or the binary
expression operation is invalid for the data types of the two
operands. [1140850688]
mpi_comm = MPI_COMM_WORLD
---------------^
hypre.F90(100): error #6478: A type-name must not be used as a
variable. [MPI_COMM]
call HYPRE_StructGridCreate(mpi_comm, 3, grid_hypre, ierr)
...
What's actually happening? Why can't I compile now?
On GNU gfortran:
I tried to use similar tactics as above here. However, when compiling
math_routine.F90, I got the error:
math_routine.F90:1333:21:
call subb(orig,vert1,tvec)
1
Error: Invalid procedure argument at (1)
math_routine.F90:1339:18:
qvec = cross_pdt2(tvec,edge1)
1
Error: Invalid procedure argument at (1)
math_routine.F90:1345:21:
uu = dot_product(tvec,pvec)
1
Error: ‘vector_a’ argument of ‘dot_product’ intrinsic at (1) must be
numeric or LOGICAL
math_routine.F90:1371:21:
uu = dot_product(tvec,pvec)
These errors were not present before. My variables are mostly vectors:
real(8), intent(in) ::
orig(3),infinity(3),vert1(3),vert2(3),vert3(3),normal(3)
real(8) :: uu,vv,dir(3)
real(8) :: edge1(3),edge2(3),tvec(3),pvec(3),qvec(3),det,inv_det,epsilon,d,t
I wonder what happened?
Please advice.
--
Thank you very much.
Yours sincerely,
================================================
TAY Wee-Beng 郑伟明
Research Scientist
Experimental AeroScience Group
Temasek Laboratories
National University of Singapore
T-Lab Building
5A, Engineering Drive 1, #02-02
Singapore 117411
Phone: +65 65167330
E-mail: tsltaywb at nus.edu.sg
http://www.temasek-labs.nus.edu.sg/program/program_aeroexperimental_tsltaywb.php
Personal research webpage: http://tayweebeng.wixsite.com/website
Youtube research showcase: https://www.youtube.com/channel/UC72ZHtvQNMpNs2uRTSToiLA
linkedin: www.linkedin.com/in/tay-weebeng
================================================
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