[petsc-users] Integration of hyper & trilinos

[Fazlul Huq]

I think error is in this portion, but I don't know how to fix:

/home/jimmy/projects/petsc/include/petscsys.h:159:6: error: #error "PETSc
was configured with one MPICH mpi.h version but now appears to be compiling
using a different MPICH mpi.h version"
 #    error "PETSc was configured with one MPICH mpi.h version but now
appears to be compiling using a different MPICH mpi.h version"
      ^~~~~
gmakefile:150: recipe for target
'arch-linux2-c-debug/obj/sys/info/verboseinfo.o' failed
make[2]: *** [arch-linux2-c-debug/obj/sys/info/verboseinfo.o] Error 1
make[2]: *** Waiting for unfinished jobs....
Use "/usr/bin/make V=1" to see verbose compile lines, "/usr/bin/make V=0"
to suppress.
          FC arch-linux2-c-debug/obj/sys/fsrc/somefort.o
          FC arch-linux2-c-debug/obj/sys/f90-src/fsrc/f90_fwrap.o
          FC arch-linux2-c-debug/obj/sys/f90-mod/petscsysmod.o
make[2]: Leaving directory '/home/jimmy/projects/petsc'
/home/jimmy/projects/petsc/lib/petsc/conf/rules:81: recipe for target
'gnumake' failed
make[1]: *** [gnumake] Error 2
make[1]: Leaving directory '/home/jimmy/projects/petsc'
**************************ERROR*************************************
  Error during compile, check arch-linux2-c-debug/lib/petsc/conf/make.log
  Send it and arch-linux2-c-debug/lib/petsc/conf/configure.log to
petsc-maint at mcs.anl.gov
********************************************************************
makefile:30: recipe for target 'all' failed
make: *** [all] Error 1

Thanks.
Huq

On Thu, Aug 30, 2018 at 11:22 AM Matthew Knepley <knepley at gmail.com> wrote:

> On Thu, Aug 30, 2018 at 11:59 AM Fazlul Huq <huq2090 at gmail.com> wrote:
>
>> I did that and I got the following error:
>>
>> **************************ERROR*************************************
>>   Error during compile, check arch-linux2-c-debug/lib/petsc/conf/make.log
>>   Send it and arch-linux2-c-debug/lib/petsc/conf/configure.log to
>> petsc-maint at mcs.anl.gov
>>
>
> See the message above. It suggests a course of action.
>
>    Matt
>
>
>> ********************************************************************
>> Thanks,
>> Huq
>>
>> On Thu, Aug 30, 2018 at 10:55 AM Jed Brown <jed at jedbrown.org> wrote:
>>
>>> Fazlul Huq <huq2090 at gmail.com> writes:
>>>
>>> > I have run:
>>> >
>>> > jimmy at dave:~/projects/petsc$ ./configure --download-hyper
>>> > &
>>> > jimmy at dave:~/projects/petsc$ ./configure --download-ml
>>>
>>> The package name is hypre, not hyper.  And you need to pass both at once
>>> if you want both libraries to be available.
>>>
>>> > At the end I got following message:
>>> >
>>> >
>>> xxx=========================================================================xxx
>>> >  Configure stage complete. Now build PETSc libraries with (gnumake
>>> build):
>>> >    make PETSC_DIR=/home/jimmy/projects/petsc
>>> PETSC_ARCH=arch-linux2-c-debug
>>> > all
>>> >
>>> xxx=========================================================================xxx
>>> >
>>> > Am I ready to use it now or do I need no make it first?
>>>
>>> As the message says, you need to issue that command to build.
>>>
>>> > Or do I need to edit .bashrc file with,
>>> >
>>> > export PETSC_DIR=/home/jimmy/projects/petsc
>>> > &
>>> > export PETSC_ARCH=arch-linux2-c-debug all
>>> >
>>> > And then run make from command window?
>>> >
>>> > Thanks.
>>> > Huq
>>> >
>>> >
>>> > On Thu, Aug 30, 2018 at 9:40 AM Jed Brown <jed at jedbrown.org> wrote:
>>> >
>>> >> You would configure PETSc with --download-hypre and --download-ml
>>> (this
>>> >> part of Trilinos can be installed on its own).  Then run your
>>> >> application with run-time options like -pc_type hypre or -pc_type ml.
>>> >> See the user's manual and/or tutorials.
>>> >>
>>> >> Fazlul Huq <huq2090 at gmail.com> writes:
>>> >>
>>> >> > Hello Petsc developers,
>>> >> >
>>> >> > 1. I want to integrate petsc with hyper and trilinos cause I want to
>>> >> solve
>>> >> > some   problems using multigrid. I know, I need to download and
>>> install
>>> >> > both of them and then configure petsc with hyper and trilinos to
>>> use them
>>> >> > with petsc. But, I don't know how to configure petsc with hyper and
>>> >> > trilinos or any other package. Is it like, running some command from
>>> >> > terminal or editing .bashrc file? Currently, this is the .bashrc
>>> file
>>> >> > regarding petsc in my desktop:
>>> >> >
>>> >> > export PETSC_DIR=/home/jimmy/projects/petsc
>>> >> >
>>> >> > 2. Can I use c programming routine in petsc code and make and run
>>> it? If
>>> >> > yes then what is the procedure? Last day I tried to do that but I
>>> got
>>> >> error
>>> >> > message while making the file.
>>> >> >
>>> >> > Thanks.
>>> >> >
>>> >> > --
>>> >> >
>>> >> > Fazlul Huq
>>> >> > Graduate Research Assistant
>>> >> > Department of Nuclear, Plasma & Radiological Engineering (NPRE)
>>> >> > University of Illinois at Urbana-Champaign (UIUC)
>>> >> > E-mail: huq2090 at gmail.com
>>> >>
>>> >
>>> >
>>> > --
>>> >
>>> > Fazlul Huq
>>> > Graduate Research Assistant
>>> > Department of Nuclear, Plasma & Radiological Engineering (NPRE)
>>> > University of Illinois at Urbana-Champaign (UIUC)
>>> > E-mail: huq2090 at gmail.com
>>>
>>
>>
>> --
>>
>> Fazlul Huq
>> Graduate Research Assistant
>> Department of Nuclear, Plasma & Radiological Engineering (NPRE)
>> University of Illinois at Urbana-Champaign (UIUC)
>> E-mail: huq2090 at gmail.com
>>
>
>
> --
> What most experimenters take for granted before they begin their
> experiments is infinitely more interesting than any results to which their
> experiments lead.
> -- Norbert Wiener
>
> https://www.cse.buffalo.edu/~knepley/
> <http://www.cse.buffalo.edu/~knepley/>
>


-- 

Fazlul Huq
Graduate Research Assistant
Department of Nuclear, Plasma & Radiological Engineering (NPRE)
University of Illinois at Urbana-Champaign (UIUC)
E-mail: huq2090 at gmail.com
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