[petsc-users] PETSC on Cray Hazelhen

[Matthew Knepley]

On Tue, Jun 13, 2017 at 3:48 AM, Vaz, Guilherme <G.Vaz at marin.nl> wrote:

> Dear all,
>
> I am trying to install PETSC on a Cray XC40 system (Hazelhen) with the
> usual Cray wrappers for Intel compilers, with some chosen external packages
> and MKL libraries.
>
> I read some threads in the mailing list about this, and I tried the
> petsc-3.7.5/config/examples/arch-cray-xt6-pkgs-opt.py configuration options.
> After trying this (please abstract from my own env vars),
> CONFOPTS="--prefix=$PETSC_INSTALL_DIR \
>               --with-cc=cc \
>               --with-cxx=CC \
>               --with-fc=ftn \
>               --with-clib-autodetect=0 \
>               --with-cxxlib-autodetect=0 \
>               --with-fortranlib-autodetect=0 \
>               --COPTFLAGS=-fast -mp \
>               --CXXOPTFLAGS=-fast -mp \
>               --FOPTFLAGS=-fast -mp \
>               --with-shared-libraries=0 \
>               --with-batch=1 \
>               --with-x=0 \
>               --with-mpe=0 \
>               --with-debugging=0 \
>               --download-superlu_dist=$SOURCE_DIR/$SUPERLU_SOURCE_FILE \
>               --with-blas-lapack-dir=$BLASDIR \
>               --download-parmetis=$SOURCE_DIR/$PARMETIS_SOURCE_FILE \
>               --download-metis=$SOURCE_DIR/$METIS_SOURCE_FILE \
>               --with-external-packages-dir=$INSTALL_DIR \
>               --with-ssl=0 "
>
>
> I get the following error:
>
>
> TESTING: checkFortranLinkingCxx from config.compilers(/zhome/
> academic/HLRS/pri/iprguvaz/ReFRESCO/Dev/trunk/Libs/build/
> petsc-3.7.5/config/BuildSystem/config/compilers.py:1097)
> ************************************************************
> *******************
>          UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for
> details):
> ------------------------------------------------------------
> -------------------
> Fortran could not successfully link C++ objects
> ************************************************************
> *******************
>
> Does it ring a bell? Any tips?
>

You turned off autodetection, so it will not find libstdc++. That either
has to be put in LIBS, or I would recommend

  --with-cxx=0

since nothing you have there requires C++.

  Thanks,

    Matt


> Thanks,
> Guilherme V.
>
> dr. ir. Guilherme Vaz | CFD Research Coordinator / Senior CFD Researcher  |
> Research & Development
> MARIN | T +31 317 49 33 25 <+31%20317%20493%20325> | M +31 621 13 11 97 |
> G.Vaz at marin.nl | www.marin.nl
>
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>


-- 
What most experimenters take for granted before they begin their
experiments is infinitely more interesting than any results to which their
experiments lead.
-- Norbert Wiener

http://www.caam.rice.edu/~mk51/
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