[petsc-users] PetscFECreateDefault in Fortran
Matthew Knepley
knepley at gmail.com
Thu Jun 1 16:57:05 CDT 2017
On Thu, Jun 1, 2017 at 2:59 PM, Justin Pogacnik <j.pogacnik at auckland.ac.nz>
wrote:
> All good. Thanks Matt. Will keep an eye out for that update. :)
>
I have checked, and I was wrong before. I did write the code for
PetscQuadratureGet/RestoreData()
in Fortran. Since it uses array arguments, I used F90. Thus you have to use
F90 pointers, in the
same style as DMPlexGet/RestoreCone() in this example:
https://bitbucket.org/petsc/petsc/src/a19fbe4d52f99f875359274419a2d40a87edfba3/src/dm/impls/plex/examples/tutorials/ex1f90.F90?at=master&fileviewer=file-view-default
Let me know if that is not understandable
Thanks,
Matt
> -Justin
> ------------------------------
> *From:* Matthew Knepley <knepley at gmail.com>
> *Sent:* Friday, June 2, 2017 12:52 AM
>
> *To:* Justin Pogacnik
> *Cc:* petsc-users at mcs.anl.gov
> *Subject:* Re: [petsc-users] PetscFECreateDefault in Fortran
>
> On Wed, May 31, 2017 at 10:00 PM, Justin Pogacnik <
> j.pogacnik at auckland.ac.nz> wrote:
>
>> Thanks Matt! That works perfectly now. I have another question regarding
>> accessing the quadrature information.
>>
>>
>> When I use PetscFEGetQuadrature(), then PetscQuadratureView(), I see what
>> I expect regarding point locations, weights.
>>
>>
>> However, when I try to use PetscQuadratureGetData() the pointers seem to
>> point to random memory locations.
>>
>>
>> The exact line from my test problem is: call
>> PetscQuadratureGetData(quad,q_nc,q_dim,q_num,pq_points,pq_weights,ierr);
>>
>> where the pq_* are the pointers giving strange output. The q_nc, q_dim,
>> and q_num are all giving what I would expect to see.
>>
> You are clearly the first Fortran user interested in this stuff ;)
> Handling of arrays in Fortran demands some more work
> from us. I need to write a wrapper for that function. I will do it as soon
> as I can.
>
> Thanks,
>
> Matt
>
>> Happy to send along the file if that helps.
>>
>>
>> Thanks again,
>>
>>
>> Justin
>> ------------------------------
>> *From:* Matthew Knepley <knepley at gmail.com>
>> *Sent:* Thursday, June 1, 2017 1:34 AM
>> *To:* Justin Pogacnik
>> *Cc:* petsc-users at mcs.anl.gov
>> *Subject:* Re: [petsc-users] PetscFECreateDefault in Fortran
>>
>> On Wed, May 31, 2017 at 7:53 AM, Matthew Knepley <knepley at gmail.com>
>> wrote:
>>
>>> On Tue, May 30, 2017 at 10:19 PM, Justin Pogacnik <
>>> j.pogacnik at auckland.ac.nz> wrote:
>>>
>>>> Hello,
>>>>
>>>> I'm developing a finite element code in fortran 90. I recently updated
>>>> my PETSc and am now getting the following error during compile/linking on
>>>> an existing application:
>>>>
>>>> Undefined symbols for architecture x86_64:
>>>>
>>>> "_petscfecreatedefault_", referenced from:
>>>>
>>>> _MAIN__ in fe_test.o
>>>>
>>>> ld: symbol(s) not found for architecture x86_64
>>>>
>>>> collect2: error: ld returned 1 exit status
>>>>
>>>> make: *** [dist/fe_test] Error 1
>>>>
>>>>
>>>> I'm running Mac OS X Yosemite (10.10.5). I've created a "minimum
>>>> working example" (attached) that re-creates the problem. It's basically
>>>> just dm/impls/plex/examples/tutorials/ex3f90, but tries to create a
>>>> PetscFE object. Everything goes fine and the DM looks like what is expected
>>>> if PetscFECreateDefault is commented out. Any idea what am I missing?
>>>>
>>> Yes, I had not made a Fortran binding for this function. I will do it
>>> now.
>>>
>>
>> I have merged it to the 'next' branch, and it will be in 'master' soon.
>>
>> Thanks,
>>
>> Matt
>>
>>
>>> Thanks,
>>>
>>> Matt
>>>
>>>
>>>> Many thanks!
>>>>
>>>> Justin
>>>>
>>>>
>>>>
>>>>
>>>>
>>>
>>>
>>> --
>>> What most experimenters take for granted before they begin their
>>> experiments is infinitely more interesting than any results to which their
>>> experiments lead.
>>> -- Norbert Wiener
>>>
>>> http://www.caam.rice.edu/~mk51/
>>>
>>
>>
>>
>> --
>> What most experimenters take for granted before they begin their
>> experiments is infinitely more interesting than any results to which their
>> experiments lead.
>> -- Norbert Wiener
>>
>> http://www.caam.rice.edu/~mk51/
>>
>
>
>
> --
> What most experimenters take for granted before they begin their
> experiments is infinitely more interesting than any results to which their
> experiments lead.
> -- Norbert Wiener
>
> http://www.caam.rice.edu/~mk51/
>
--
What most experimenters take for granted before they begin their
experiments is infinitely more interesting than any results to which their
experiments lead.
-- Norbert Wiener
http://www.caam.rice.edu/~mk51/
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