[petsc-users] SLEPc Eigenvalue problem - Zero Pivot

venkatesh g venkateshgk.j at gmail.com
Fri May 15 05:49:41 CDT 2015


Hi,
'make test' was successful on the $PETSC_DIR.
I configured MUMPS, metis, parmetis, scalapack through
'--download-mumps=/path/MUMPS_4.10.0-p3.tar.gz' and etc..

I will anyway download the new version and start installing it now., Is it
due to some flag issue ? I have attached my makefile.

Venkatesh




On Fri, May 15, 2015 at 4:12 PM, Jose E. Roman <jroman at dsic.upv.es> wrote:

>
> El 15/05/2015, a las 12:34, venkatesh g escribió:
>
> > Hi,
> > I configured and installed MUMPS along with PETSc and installed SLEPc.
> >
> > Now I am trying to make the executable for ex7.c from SLEPc examples.
> >
> > I am getting following errors while doing make:
> >
> >
> ../../petsc-3.3-p7/linux-gnu-intel-cmplx-batch/lib//libpetsc.a(mumps.c.o):
> In function `MatDestroy_MUMPS':
> >
> /cluster/share/venkatesh/petsc-3.3-p7/src/mat/impls/aij/mpi/mumps/mumps.c:493:
> undefined reference to `zmumps_c'
> >
> ../../petsc-3.3-p7/linux-gnu-intel-cmplx-batch/lib//libpetsc.a(mumps.c.o):
> In function `MatSolve_MUMPS':
> >
> /cluster/share/venkatesh/petsc-3.3-p7/src/mat/impls/aij/mpi/mumps/mumps.c:546:
> undefined reference to `zmumps_c'
> >
> ../../petsc-3.3-p7/linux-gnu-intel-cmplx-batch/lib//libpetsc.a(mumps.c.o):
> In function `MatFactorNumeric_MUMPS':
> >
> /cluster/share/venkatesh/petsc-3.3-p7/src/mat/impls/aij/mpi/mumps/mumps.c:664:
> undefined reference to `zmumps_c'
> >
> ../../petsc-3.3-p7/linux-gnu-intel-cmplx-batch/lib//libpetsc.a(mumps.c.o):
> In function `PetscInitializeMUMPS':
> >
> /cluster/share/venkatesh/petsc-3.3-p7/src/mat/impls/aij/mpi/mumps/mumps.c:799:
> undefined reference to `zmumps_c'
> >
> ../../petsc-3.3-p7/linux-gnu-intel-cmplx-batch/lib//libpetsc.a(mumps.c.o):
> In function `MatLUFactorSymbolic_AIJMUMPS':
> >
> /cluster/share/venkatesh/petsc-3.3-p7/src/mat/impls/aij/mpi/mumps/mumps.c:896:
> undefined reference to `zmumps_c'
> >
> ../../petsc-3.3-p7/linux-gnu-intel-cmplx-batch/lib//libpetsc.a(mumps.c.o):/cluster/share/venkatesh/petsc-3.3-p7/src/mat/impls/aij/mpi/mumps/mumps.c:974:
> more undefined references to `zmumps_c' follow
> >
> ../../petsc-3.3-p7/linux-gnu-intel-cmplx-batch/lib//libpetsc.a(pmetis.c.o):
> In function `MatPartitioningApply_Parmetis':
> >
> /cluster/share/venkatesh/petsc-3.3-p7/src/mat/partition/impls/pmetis/pmetis.c:101:
> undefined reference to `ParMETIS_V3_PartKway'
> >
> ../../petsc-3.3-p7/linux-gnu-intel-cmplx-batch/lib//libpetsc.a(pmetis.c.o):
> In function `MatMeshToCellGraph':
> >
> /cluster/share/venkatesh/petsc-3.3-p7/src/mat/partition/impls/pmetis/pmetis.c:360:
> undefined reference to `ParMETIS_V3_Mesh2Dual'
> > collect2: ld returned 1 exit status
> > make: *** [ex7] Error 1
> >
> > Pls let me know what to do ?
> >
> > Venkatesh
> >
>
>
> Suggest upgrading to the latest PETSc/SLEPc, version 3.3 is almost 3-years
> old.
>
> Did 'make test' on $PETSC_DIR work?
>
> Did you install a standalone MUMPS yourself? Maybe it is better to let
> PETSc install it for you. In 3.5, run PETSc's configure with:
> --download-mumps --download-metis --download-parmetis --download-scalapack
>
> Jose
>
>
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