[petsc-users] petsc 3.5.3, Time Stepping, printing -help, bug

Barry Smith bsmith at mcs.anl.gov
Sat Mar 7 11:37:11 CST 2015


  Thanks for reporting this. I just fixed it a couple of days ago in a branch that will soon get into master

  Barry

> On Mar 7, 2015, at 7:28 AM, Lukasz Kaczmarczyk <Lukasz.Kaczmarczyk at glasgow.ac.uk> wrote:
> 
> Hello, 
> 
> Printing -help I get following error. I believe that bug is here,
> 
> [0]PETSC ERROR: #4 PetscOptionsRealArray_Private() line 1306 in /opt/petsc/src/sys/objects/aoptions.c
> ierr = (*PetscHelpPrintf)(PetscOptionsObject->comm,"  -%s%s <%G",PetscOptionsObject->prefix?PetscOptionsObject->prefix:"",opt+1,value[0]);CHKERRQ(ierr); 
> 
> My git commit:
> git rev-parse HEAD
> ee900cc92187a7889ca4f268c65f36fb91826ff2
> 
> Pleas see following error trial:
> 
> [0]PETSC ERROR: No support for this operation for this object type
> [0]PETSC ERROR: %G format is no longer supported, use %g and cast the argument to double
> [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting.
> [0]PETSC ERROR: Petsc Development GIT revision: v3.5.3-1524-gee900cc  GIT Date: 2015-01-31 17:44:15 -0600
> [0]PETSC ERROR: /mofem_build/um_debug/nonlinear_elasticity/nonlinear_dynamics on a arch-linux2-c-debug named likask by root Sat Mar  7 13:07:58 2015
> [0]PETSC ERROR: Configure options --with-mpi=1 --with-debugging=1 --download-superlu_dist=1 --download-metis=1 --download-parmetis=1 --download-hypre=1 --download-mumps=1 --download-scalapack=1 --download-zoltan=1 --download-blacs=1 --download-moab = 1 --download-ptscotch=1 --with-hdf5=1 --with-hdf5-dir=/usr --download-netcdf=1 --with-shared-libraries=1
> [0]PETSC ERROR: #1 PetscFormatConvert() line 67 in /opt/petsc/src/sys/fileio/mprint.c
> [0]PETSC ERROR: #2 PetscVFPrintfDefault() line 192 in /opt/petsc/src/sys/fileio/mprint.c
> [0]PETSC ERROR: #3 PetscHelpPrintfDefault() line 601 in /opt/petsc/src/sys/fileio/mprint.c
> [0]PETSC ERROR: #4 PetscOptionsRealArray_Private() line 1306 in /opt/petsc/src/sys/objects/aoptions.c
> [0]PETSC ERROR: #5 TSAdaptSetFromOptions_Basic() line 83 in /opt/petsc/src/ts/adapt/impls/basic/adaptbasic.c
> [0]PETSC ERROR: #6 TSAdaptSetFromOptions() line 392 in /opt/petsc/src/ts/adapt/interface/tsadapt.c
> [0]PETSC ERROR: #7 TSSetFromOptions() line 332 in /opt/petsc/src/ts/interface/ts.c
> [0]PETSC ERROR: #8 main() line 579 in /mnt/home/MyBuild/mofem-cephas/mofem_v0.2/users_modules/nonlinear_elasticity/nonlinear_dynamics.cpp
> 
> [0]PETSC ERROR: PETSc Option Table entries:
> [0]PETSC ERROR: -help
> [0]PETSC ERROR: -ksp_atol 1e-10
> [0]PETSC ERROR: -ksp_rtol 1e-10
> [0]PETSC ERROR: -ksp_type fgmres
> [0]PETSC ERROR: -my_disp_order 3
> [0]PETSC ERROR: -my_file LShape.cub
> [0]PETSC ERROR: -my_max_post_proc_ref_level 0
> [0]PETSC ERROR: -my_output_prt 1
> [0]PETSC ERROR: -my_time_data_file data.txt
> [0]PETSC ERROR: -my_vel_order 3
> [0]PETSC ERROR: -pc_factor_mat_solver_package superlu_dist
> [0]PETSC ERROR: -pc_type lu
> [0]PETSC ERROR: -snes_atol 1e-7
> [0]PETSC ERROR: -snes_linesearch_type basic
> [0]PETSC ERROR: -snes_max_it 100
> [0]PETSC ERROR: -snes_monitor
> [0]PETSC ERROR: -snes_rtol 1e-7
> [0]PETSC ERROR: -snes_type newtonls
> [0]PETSC ERROR: -ts_dt 0.001
> [0]PETSC ERROR: -ts_final_time 0.002
> [0]PETSC ERROR: -ts_monitor
> [0]PETSC ERROR: -ts_type beuler
> 
> 
> Kind regards,
> Lukasz
> 
> 
> Lukasz Kaczmarczyk
> 
> "Prediction is very difficult, especially about the future." -- Niels Bohr
> "... there are dark corners in the Bourne shell, and people use all of them." --Chet Ramey
> 
> HomePage:
> http://www.gla.ac.uk/schools/engineering/staff/lukaszkaczmarczyk/
> 
> MoFEM JosePH (Finite Element System) 
> * https://en.wikipedia.org/wiki/MoFEM_JosePH
> * https://bitbucket.org/likask/mofem-joseph/wiki/Home
> 
> 
> 



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