[petsc-users] Question about the error message

Michael Povolotskyi mpovolot at purdue.edu
Mon Jun 29 09:59:36 CDT 2015


Dear PETSc developers and users,
what does this error message mean?

[0]PETSC ERROR: --------------------- Error Message 
------------------------------------
[0]PETSC ERROR: Argument out of range!
[0]PETSC ERROR: nnz cannot be greater than row length: local row 0 value 
108 rowlength 72!
[0]PETSC ERROR: 
------------------------------------------------------------------------
[0]PETSC ERROR: Petsc Release Version 3.4.3, Oct, 15, 2013
[0]PETSC ERROR: See docs/changes/index.html for recent updates.
[0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
[0]PETSC ERROR: See docs/index.html for manual pages.
[0]PETSC ERROR: 
------------------------------------------------------------------------
[0]PETSC ERROR: /home/mpovolot/NEMO5/prototype/nemo on a linux-static 
named conte-fe02.rcac.purdue.edu by mpovolot Mon Jun 29 10:49:32 2015
[0]PETSC ERROR: Libraries linked from 
/apps/rhel6/petsc/3.4.3_impi-4.1.1.036_intel-13.1.1.163/linux-static/lib
[0]PETSC ERROR: Configure run at Sun Jan 19 12:47:22 2014
[0]PETSC ERROR: Configure options --with-cc=mpiicc --with-cxx=mpiicpc 
--with-fc=mpiifort --download-sowing --with-scalar-type=complex 
--with-shared-libraries=0 --with-pic=1 --with-clanguage=C++ 
--with-fortran=1 --with-fortran-kernels=0 --with-debugging=0 
--with-blas-lapack-dir=/apps/rhel6/intel/composer_xe_2013.3.163/mkl/lib/intel64 
--with-blacs-lib=/apps/rhel6/intel/composer_xe_2013.3.163/mkl/lib/intel64/libmkl_blacs_intelmpi_lp64.so 
--with-blacs-include=/apps/rhel6/intel/composer_xe_2013.3.163/mkl/include --with-scalapack-lib="-L/apps/rhel6/intel/composer_xe_2013.3.163/mkl/lib/intel64 
-lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64" 
--with-scalapack-include=/apps/rhel6/intel/composer_xe_2013.3.163/mkl/include 
--COPTFLAGS=-O3 --CXXOPTFLAGS=-O3 --FOPTFLAGS=-O3 --download-hdf5=yes 
--download-metis=yes --download-parmetis=yes --download-superlu_dist=yes 
--download-mumps=yes --download-hypre=no --download-spooles=yes
[0]PETSC ERROR: 
------------------------------------------------------------------------
[0]PETSC ERROR: MatSeqAIJSetPreallocation_SeqAIJ() line 3524 in 
/apps/rhel6/petsc/3.4.3_impi-4.1.1.036_intel-13.1.1.163/src/mat/impls/aij/seq/aij.c
[0]PETSC ERROR: MatSeqAIJSetPreallocation() line 3496 in 
/apps/rhel6/petsc/3.4.3_impi-4.1.1.036_intel-13.1.1.163/src/mat/impls/aij/seq/aij.c
[0]PETSC ERROR: MatAXPY_SeqAIJ() line 2710 in 
/apps/rhel6/petsc/3.4.3_impi-4.1.1.036_intel-13.1.1.163/src/mat/impls/aij/seq/aij.c
[0]PETSC ERROR: MatAXPY() line 39 in 
/apps/rhel6/petsc/3.4.3_impi-4.1.1.036_intel-13.1.1.163/src/mat/utils/axpy.c
terminate called after throwing an instance of 'n5_runtime_error'
   what():  [PetscMatrixNemo<cplx>] PETSc gave error with code 63:
     Argument out of range
      .

Program received signal SIGABRT, Aborted.

Thank you,
Michael.



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