[petsc-users] DMNetworkGetEdgeRange() in parallel
Miguel Angel Salazar de Troya
salazardetroya at gmail.com
Mon Feb 23 08:42:19 CST 2015
Thanks, that will help me. Now what I would like to have is the following:
if I have two processors and ten edges, the partitioning results in the
first processor having the edges 0-4 and the second processor, the edges
5-9. I also have a global vector with as many components as edges, 10. How
can I partition it so the first processor also has the 0-4 components and
the second, the 5-9 components of the vector?
Miguel
On Feb 23, 2015 8:08 AM, "Abhyankar, Shrirang G." <abhyshr at mcs.anl.gov>
wrote:
> Miguel,
> One possible way is to store the global numbering of any edge/vertex in
> the "component" attached to it. Once the mesh gets partitioned, the
> components are also distributed so you can easily retrieve the global
> number of any edge/vertex by accessing its component. This is what is done
> in the DMNetwork example pf.c although the global numbering is not used for
> anything.
>
> Shri
> From: Matthew Knepley <knepley at gmail.com>
> Date: Mon, 23 Feb 2015 07:54:34 -0600
> To: Miguel Angel Salazar de Troya <salazardetroya at gmail.com>
> Cc: "petsc-users at mcs.anl.gov" <petsc-users at mcs.anl.gov>
> Subject: Re: [petsc-users] DMNetworkGetEdgeRange() in parallel
>
> On Sun, Feb 22, 2015 at 3:59 PM, Miguel Angel Salazar de Troya <
> salazardetroya at gmail.com> wrote:
>
>> Thanks. Once I obtain that Index Set with the routine DMPlexCreateCellNumbering()
>> (I assume that the edges in DMNetwork correspond to cells in DMPlex) can I
>> use it to partition a vector with as many components as edges I have in my
>> network?
>>
>
> I do not completely understand the question.
>
> If you want a partition of the edges, you can use
> DMPlexCreatePartition() and its friend DMPlexDistribute(). What
> are you trying to do?
>
> Matt
>
>
>> Thanks
>> Miguel
>>
>> On Sun, Feb 22, 2015 at 12:15 PM, Matthew Knepley <knepley at gmail.com>
>> wrote:
>>
>>> On Sun, Feb 22, 2015 at 11:01 AM, Miguel Angel Salazar de Troya <
>>> salazardetroya at gmail.com> wrote:
>>>
>>>> Hi
>>>>
>>>> I noticed that the routine DMNetworkGetEdgeRange() returns the local
>>>> indices for the edge range. Is there any way to obtain the global indices?
>>>> So if my network has 10 edges, the processor 1 has the 0-4 edges and the
>>>> processor 2, the 5-9 edges, how can I obtain this information?
>>>>
>>>
>>> One of the points of DMPlex is we do not require a global numbering.
>>> Everything is numbered
>>> locally, and the PetscSF maps local numbers to local numbers in order to
>>> determine ownership.
>>>
>>> If you want to create a global numbering for some reason, you can
>>> using DMPlexCreatePointNumbering().
>>> There are also cell and vertex versions that we use for output, so you
>>> could do it just for edges as well.
>>>
>>> Thanks,
>>>
>>> Matt
>>>
>>>
>>>> Thanks
>>>> Miguel
>>>>
>>>> --
>>>> *Miguel Angel Salazar de Troya*
>>>> Graduate Research Assistant
>>>> Department of Mechanical Science and Engineering
>>>> University of Illinois at Urbana-Champaign
>>>> (217) 550-2360
>>>> salaza11 at illinois.edu
>>>>
>>>>
>>>
>>>
>>> --
>>> What most experimenters take for granted before they begin their
>>> experiments is infinitely more interesting than any results to which their
>>> experiments lead.
>>> -- Norbert Wiener
>>>
>>
>>
>>
>> --
>> *Miguel Angel Salazar de Troya*
>> Graduate Research Assistant
>> Department of Mechanical Science and Engineering
>> University of Illinois at Urbana-Champaign
>> (217) 550-2360
>> salaza11 at illinois.edu
>>
>>
>
>
> --
> What most experimenters take for granted before they begin their
> experiments is infinitely more interesting than any results to which their
> experiments lead.
> -- Norbert Wiener
>
>
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