[petsc-users] configure error with --with-shared-libraries=0 --download-elemental

[George Pau]

Barry,

Thanks.  The patch works.

George


On Tue, Aug 4, 2015 at 12:33 PM, Barry Smith <bsmith at mcs.anl.gov> wrote:

>
>   Aghh, looks like CMake does not have a universal standard for indicating
> shared libraries or not.
>
>   Please try the attached elemental.py file and see if that resolves your
> difficulties.
>
>
>
>   Barry
>
> > On Aug 4, 2015, at 12:22 PM, George Pau <gpau at lbl.gov> wrote:
> >
> > Hi,
> >
> > I am configuring petsc on NERSC/Edison with the following configure
> arguments:
> >
> > --with-debugging=1 --with-shared-libraries=0
> --prefix=/global/homes/g/gpau/clm-rom/install/t
> > pls --with-cxx-dialect=C++11 --download-elemental --download-mumps
> --download-scalapack --do
> > wnload-parmetis --download-metis --download-hdf5 --download-netcdf
> --with-x=0 --with-cc=/opt
> > /cray/craype/2.3.1/bin/cc --with-cxx=/opt/cray/craype/2.3.1/bin/CC
> --with-fc=/opt/cray/crayp
> > e/2.3.1/bin/ftn
> >
> > but it seems like the --with-shared-libraries=0 is not propagated when
> building elemental.  In the end I get the following error:
> >
> > gmake[3]: Leaving directory
> `/global/u1/g/gpau/clm-rom/build/tpl-build/petsc/petsc-3.6.1-sou
> >
> rce/arch-linux2-c-debug/externalpackages/Elemental-0.85-p1/build'/usr/bin/ld:
> /usr/common/us
> > g/darshan/2.3.0/lib/libdarshan-mpi-io.a(darshan-mpi-io.o): relocation
> R_X86_64_32 against `.
> > rodata' can not be used when making a shared object; recompile with -fPIC
> >
> > Any help will be appreciated.  Attached is the configure log file.
> >
> > Thanks,
> > George
> >
> >
> > --
> > George Pau
> > Earth Sciences Division
> > Lawrence Berkeley National Laboratory
> > One Cyclotron, MS 74-120
> > Berkeley, CA 94720
> >
> > (510) 486-7196
> > gpau at lbl.gov
> > http://esd.lbl.gov/about/staff/georgepau/
> > <petsc-configure-out.log>
>
>
>


-- 
George Pau
Earth Sciences Division
Lawrence Berkeley National Laboratory
One Cyclotron, MS 74-120
Berkeley, CA 94720

(510) 486-7196
gpau at lbl.gov
http://esd.lbl.gov/about/staff/georgepau/
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