[petsc-users] Lookup error in PetscTableFind()

[Luc Berger-Vergiat]

Hi,
I am running a code on CETUS and I use PETSc for as a linear solver.
Here is my submission command:

    qsub -A shearbands -t 60 -n 4 -O 4nodes_32cores_Mult --mode script
    4nodes_32cores_LU


Here is "4nodes_32cores_LU":

    #!/bin/sh

    LOCARGS="--block $COBALT_PARTNAME ${COBALT_CORNER:+--corner}
    $COBALT_CORNER ${COBALT_SHAPE:+--shape} $COBALT_SHAPE"
    echo "Cobalt location args: $LOCARGS" >&2

    ################################
    #   32 cores on 4 nodes jobs   #
    ################################
    runjob --np 32 -p 8 --block $COBALT_PARTNAME --cwd
    /projects/shearbands/job1/200/4nodes_32cores/LU --verbose=INFO
    --envs FEAPHOME8_3=/projects/shearbands/ShearBands352
    PETSC_DIR=/projects/shearbands/petsc-3.5.2
    PETSC_ARCH=arch-linux2-c-opt :
    /projects/shearbands/ShearBands352/parfeap/feap -ksp_type preonly
    -pc_type lu -pc_factor_mat_solver_package mumps -ksp_diagonal_scale
    -malloc_log mlog -log_summary time.log <
    /projects/shearbands/job1/yesfile


I get the following error message:

[7]PETSC ERROR: --------------------- Error Message 
--------------------------------------------------------------
[7]PETSC ERROR: Argument out of range
[7]PETSC ERROR: Petsc Release Version 3.5.2, unknown
[7]PETSC ERROR: key 532150 is greater than largest key allowed 459888
[7]PETSC ERROR: Configure options --known-mpi-int64_t=1 
--download-cmake=1 --download-hypre=1 --download-metis=1 
--download-parmetis=1 --download-plapack=1 --download-superlu_dist=1 
--download-mumps=1 --download-ml=1 --known-bits-per-byte=8 
--known-level1-dcache-assoc=0 --known-level1-dcache-linesize=32 
--known-level1-dcache-size=32768 --known-memcmp-ok=1 
--known-mpi-c-double-complex=1 --known-mpi-long-double=1 
--known-mpi-shared-libraries=0 --known-sizeof-MPI_Comm=4 
--known-sizeof-MPI_Fint=4 --known-sizeof-char=1 --known-sizeof-double=8 
--known-sizeof-float=4 --known-sizeof-int=4 --known-sizeof-long-long=8 
--known-sizeof-long=8 --known-sizeof-short=2 --known-sizeof-size_t=8 
--known-sizeof-void-p=8 --with-batch=1 
--with-blacs-include=/soft/libraries/alcf/current/gcc/SCALAPACK/ 
--with-blacs-lib=/soft/libraries/alcf/current/gcc/SCALAPACK/lib/libscalapack.a 
--with-blas-lapack-lib="-L/soft/libraries/alcf/current/gcc/LAPACK/lib 
-llapack -L/soft/libraries/alcf/current/gcc/BLAS/lib -lblas" 
--with-cc=mpicc --with-cxx=mpicxx --with-debugging=0 --with-fc=mpif90 
--with-fortran-kernels=1 --with-is-color-value-type=short 
--with-scalapack-include=/soft/libraries/alcf/current/gcc/SCALAPACK/ 
--with-scalapack-lib=/soft/libraries/alcf/current/gcc/SCALAPACK/lib/libscalapack.a 
--with-shared-libraries=0 --with-x=0 -COPTFLAGS=" -O3 -qhot=level=0 
-qsimd=auto -qmaxmem=-1 -qstrict -qstrict_induction" -CXXOPTFLAGS=" -O3 
-qhot=level=0 -qsimd=auto -qmaxmem=-1 -qstrict -qstrict_induction" 
-FOPTFLAGS=" -O3 -qhot=level=0 -qsimd=auto -qmaxmem=-1 -qstrict 
-qstrict_induction"

[7]PETSC ERROR: #1 PetscTableFind() line 126 in 
/gpfs/mira-fs1/projects/shearbands/petsc-3.5.2/include/petscctable.h
[7]PETSC ERROR: #2 MatSetUpMultiply_MPIAIJ() line 33 in 
/gpfs/mira-fs1/projects/shearbands/petsc-3.5.2/src/mat/impls/aij/mpi/mmaij.c
[7]PETSC ERROR: #3 MatAssemblyEnd_MPIAIJ() line 702 in 
/gpfs/mira-fs1/projects/shearbands/petsc-3.5.2/src/mat/impls/aij/mpi/mpiaij.c
[7]PETSC ERROR: #4 MatAssemblyEnd() line 4900 in 
/gpfs/mira-fs1/projects/shearbands/petsc-3.5.2/src/mat/interface/matrix.c

Well at least that is what I think comes out after I read all the jammed 
up messages from my MPI processes...

I would guess that I am trying to allocate more memory than I should 
which seems strange since the same problem runs fine on 2 nodes with 16 
cores/node

Thanks for the help

Best,
Luc

On 10/27/2014 02:51 PM, Michael Povolotskyi wrote:
> Hello,
> will the eigenvectors that correspond to degenerate eigenvalues of a 
> Hermitian matrix be orthogonal?
> I'm using Krylov Schur method.
> Thank you,
> Michael.
>

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