[petsc-users] PetscQuadratureCreate and PETSC_OBJECT_CLASSID

[Matthew Knepley]

On Tue, Nov 18, 2014 at 1:49 PM, Dave May <dave.mayhem23 at gmail.com> wrote:

> Hi,
>
> I was trying to use some of DT functionality (in particular
> PetscDTGaussTensorQuadrature()) in petsc 3.5.2 and I encountered this error:
>

I did not anticipate someone calling that before anything by itself. You
need a call to

  DMInitializePackage()

This is called by PetscQuadratureCreate().

   Matt


>
> [0]PETSC ERROR: --------------------- Error Message
> --------------------------------------------------------------
> [0]PETSC ERROR: Invalid argument
> [0]PETSC ERROR: Invalid object classid 0
> This could happen if you compile with PETSC_HAVE_DYNAMIC_LIBRARIES, but
> link with static libraries.
> [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html
> for trouble shooting.
> [0]PETSC ERROR: Petsc Release Version 3.5.2, Sep, 08, 2014
> [0]PETSC ERROR: ./dmdadg.app on a arch-darwin-c-mpi-debug-f2c named
> nikkan.local by dmay Tue Nov 18 20:34:56 2014
> [0]PETSC ERROR: Configure options --download-openmpi=yes
> --with-debugging=yes --with-fc=0 --download-f2cblaslapck=yes
> PETSC_ARCH=arch-darwin-c-mpi-debug-f2c
> [0]PETSC ERROR: #1 PetscClassRegLogGetClass() line 290 in
> /Users/dmay/software/petsc-3.5.2/src/sys/logging/utils/classlog.c
> [0]PETSC ERROR: #2 PetscLogObjCreateDefault() line 317 in
> /Users/dmay/software/petsc-3.5.2/src/sys/logging/utils/classlog.c
> [0]PETSC ERROR: #3 PetscQuadratureCreate() line 35 in
> /Users/dmay/software/petsc-3.5.2/src/dm/dt/interface/dt.c
> [0]PETSC ERROR: #4 PetscDTGaussTensorQuadrature() line 322 in
> /Users/dmay/software/petsc-3.5.2/src/dm/dt/interface/dt.c
> [0]PETSC ERROR: #5 DMDGSpace_ex4_quadrature() line 480 in dmdadg.c
> [0]PETSC ERROR: #6 main() line 503 in dmdadg.c
> [0]PETSC ERROR: ----------------End of Error Message -------send entire
> error message to petsc-maint at mcs.anl.gov----------
> --------------------------------------------------------------------------
> MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD
> with errorcode 1.
>
> NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
> You may or may not see output from other processes, depending on
> exactly when Open MPI kills them.
> --------------------------------------------------------------------------
>
> Snooping around in the source tree, the only place where I can find
> PetscHeaderCreate being passed PETSC_OBJECT_CLASSID is within
> src/dm/dt/interface/dt.c in the function PetscQuadratureCreate().
>
> Is this is a bug or is my petsc build broken??
>
> I'm sure I am linking against a dynamic library (or whatever you want to
> call a dylib on OSX)
>
> dmay at nikkan:~/codes/dgspace$ otool -L dmdadg.app
> dmdadg.app:
> *
> /Users/dmay/software/petsc-3.5.2/arch-darwin-c-mpi-debug-f2c/lib/libpetsc.3.5.dylib
> (compatibility version 3.5.0, current version 3.5.2)*
>
> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib
> (compatibility version 1.0.0, current version 1.0.0)
>
> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
> (compatibility version 1.0.0, current version 1.0.0)
>     /opt/X11/lib/libX11.6.dylib (compatibility version 10.0.0, current
> version 10.0.0)
>     /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current
> version 1197.1.1)
>     /usr/lib/libssl.0.9.8.dylib (compatibility version 0.9.8, current
> version 50.0.0)
>     /usr/lib/libcrypto.0.9.8.dylib (compatibility version 0.9.8, current
> version 50.0.0)
>
> /Users/dmay/software/petsc-3.5.2/arch-darwin-c-mpi-debug-f2c/lib/libmpi_cxx.1.dylib
> (compatibility version 3.0.0, current version 3.3.0)
>     /usr/lib/libc++.1.dylib (compatibility version 1.0.0, current version
> 120.0.0)
>
> /Users/dmay/software/petsc-3.5.2/arch-darwin-c-mpi-debug-f2c/lib/libmpi.1.dylib
> (compatibility version 7.0.0, current version 7.0.0)
>
>
>
> Cheers,
>   Dave
>



-- 
What most experimenters take for granted before they begin their
experiments is infinitely more interesting than any results to which their
experiments lead.
-- Norbert Wiener
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