[petsc-users] DMPlexDistribute error

[Matthew Knepley]

On Sun, May 18, 2014 at 10:28 PM, Scott Wales <scott.wales at unimelb.edu.au>wrote:

> Hi,
>
> I'm trying to create a distributed unstructured grid in PETSc, and have
> encountered the following error:
>
>     [0]PETSC ERROR: --------------------- Error Message
> ------------------------------------
>     [0]PETSC ERROR: Invalid argument!
>     [0]PETSC ERROR: Wrong type of object: Parameter # 1!
>     [0]PETSC ERROR: ------------------------------
> ------------------------------------------
>     [0]PETSC ERROR: Petsc Release Version 3.4.4, Mar, 13, 2014
>     [0]PETSC ERROR: See docs/changes/index.html for recent updates.
>     [0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
>     [0]PETSC ERROR: See docs/index.html for manual pages.
>     [0]PETSC ERROR: ------------------------------
> ------------------------------------------
>     [0]PETSC ERROR: bin/celllist_square on a arch-linux2-c-debug named
> raijin5 by saw562 Mon May 19 13:00:31 2014
>     [0]PETSC ERROR: Libraries linked from /home/562/saw562/opt/petsc/3.
> 4.4/lib
>     [0]PETSC ERROR: Configure run at Fri May 16 14:23:02 2014
>     [0]PETSC ERROR: Configure options --with-shared-libraries=1
> --prefix=/home/562/saw562/opt/petsc/3.4.4 --with-blas-lapack-lib="-L/
> apps/intel-ct/12.1.9.293/mkl/lib/intel64 -lmkl_intel_lp64
> -lmkl_sequential -lmkl_core -lpthread" --with-mpi-dir=/apps/openmpi/1.6.3
>     [0]PETSC ERROR: ------------------------------
> ------------------------------------------
>     [0]PETSC ERROR: ISGetIndices() line 372 in
> src/vec/is/is/interface/index.c
>     [0]PETSC ERROR: DMPlexCreatePartitionClosure() line 2637 ihttps://
> gist.github.com/ScottWales/2758b5ec96573c63e31an src/dm/impls/plex/plex.c
>     [0]PETSC ERROR: DMPlexDistribute() line 2810 in
> src/dm/impls/plex/plex.c
>
> I've created the DMPlex using `DMPlexCreateFromCellList`, added a default
> section and then called `DMPlexDistribute` to spread the grid points across
> all of the processors. You can see my test code at
> https://gist.github.com/ScottWales/2758b5ec96573c63e31a#file-
> petsc-test-c-L164. Have I missed a step in the grid setup?
>

1) I have better checking in the 'master' branch, and we are about to
release, so I recommend upgrading

2) You did not install with any mesh partitioner, so it freaked out. You
need something like --download-chaco in configure.

  Thanks,

      Matt


> Thanks, Scott
>



-- 
What most experimenters take for granted before they begin their
experiments is infinitely more interesting than any results to which their
experiments lead.
-- Norbert Wiener
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.mcs.anl.gov/pipermail/petsc-users/attachments/20140519/28066020/attachment.html>