[petsc-users] How to use command line option for separate matrix

[TAY wee-beng]

Thank you

Yours sincerely,

TAY wee-beng

On 18/3/2014 3:07 PM, Matthew Knepley wrote:
> On Tue, Mar 18, 2014 at 1:58 AM, TAY wee-beng <zonexo at gmail.com 
> <mailto:zonexo at gmail.com>> wrote:
>
>     Hi Barry,
>
>     My command line is :
>
>     mpiexec -np 46 ./a.out -options_left -poisson_ksp_view
>     -poisson_ksp_type gmres -poisson_pc_type hypre
>     -poisson_pc_type_hypre boomeramg > log
>
>  ^^^^^^^^^^^^^^^^^^^^^^^^^^^
>
>   It should be  -pisson_pc_hypre_type boomeramg, but BoomerAMG is the 
> default.
>
>     Matt

After using

mpiexec -np 46 ./a-gmres.out -options_left -poisson_ksp_type gmres 
-poisson_pc_type hypre -poisson_pc_hypre_type boomeramg > log

  I still get:

#PETSc Option Table entries:
-options_left
-poisson_ksp_type gmres
-poisson_pc_hypre_type boomeramg
-poisson_pc_type hypre
#End of PETSc Option Table entries
There is one unused database option. It is:
Option left: name:-poisson_pc_hypre_type value: boomeramg

Did I missed out something?
~
>
>     My result is :
>
>     /*KSP Object:(poisson_) 46 MPI processes
>       type: gmres
>         GMRES: restart=30, using Classical (unmodified) Gram-Schmidt
>     Orthogonalization with no iterative refinement
>         GMRES: happy breakdown tolerance 1e-30
>       maximum iterations=10000, initial guess is zero
>       tolerances:  relative=1e-05, absolute=1e-50, divergence=10000
>       left preconditioning
>       using PRECONDITIONED norm type for convergence test
>     PC Object:(poisson_) 46 MPI processes
>       type: hypre
>         HYPRE BoomerAMG preconditioning
>         HYPRE BoomerAMG: Cycle type V
>         HYPRE BoomerAMG: Maximum number of levels 25
>         HYPRE BoomerAMG: Maximum number of iterations PER hypre call 1
>         HYPRE BoomerAMG: Convergence tolerance PER hypre call 0
>         HYPRE BoomerAMG: Threshold for strong coupling 0.25
>         HYPRE BoomerAMG: Interpolation truncation factor 0
>         HYPRE BoomerAMG: Interpolation: max elements per row 0
>         HYPRE BoomerAMG: Number of levels of aggressive coarsening 0
>         HYPRE BoomerAMG: Number of paths for aggressive coarsening 1
>         HYPRE BoomerAMG: Maximum row sums 0.9
>         HYPRE BoomerAMG: Sweeps down         1
>         HYPRE BoomerAMG: Sweeps up           1
>         HYPRE BoomerAMG: Sweeps on coarse    1
>         HYPRE BoomerAMG: Relax down symmetric-SOR/Jacobi
>         HYPRE BoomerAMG: Relax up symmetric-SOR/Jacobi
>         HYPRE BoomerAMG: Relax on coarse Gaussian-elimination
>         HYPRE BoomerAMG: Relax weight  (all)      1
>         HYPRE BoomerAMG: Outer relax weight (all) 1
>         HYPRE BoomerAMG: Using CF-relaxation
>         HYPRE BoomerAMG: Measure type        local
>         HYPRE BoomerAMG: Coarsen type        Falgout
>         HYPRE BoomerAMG: Interpolation type  classical
>       linear system matrix = precond matrix:
>       Matrix Object:   46 MPI processes
>     ....
>
>     ...
>     *//*#PETSc Option Table entries:
>     -options_left
>     -poisson_ksp_type gmres
>     -poisson_pc_type hypre
>     -poisson_pc_type_hypre boomeramg
>     #End of PETSc Option Table entries
>     There is one unused database option. It is:
>     Option left: name:-poisson_pc_type_hypre value: boomeramg*/
>
>     It seems that it is using boomeramg but why does it say "one
>     unused database option"?
>
>     Did I do something wrong?
>
>     Also if only my RHS of the Poisson eqn's changes, do I set the ksp
>     and pc once at the start? E.g. :
>
>     call KSPSetType(ksp,ksptype,ierr)
>
>     ksptype=KSPGMRES
>
>     call PCSetType(pc,'hypre',ierr)
>
>     call PCHYPREGetType(pc,'boomeramg',ierr)
>
>     or do I have to do it at each time step?
>
>     Thank you
>
>     Yours sincerely,
>
>     TAY wee-beng
>
>     On 18/3/2014 2:23 AM, Barry Smith wrote:
>>       Yes. You can run with -poisson_ksp_view and -options_left to make sure the options you provide are actually used.
>>
>>         Barry
>>
>>     On Mar 17, 2014, at 9:39 AM, TAY wee-beng<zonexo at gmail.com>  <mailto:zonexo at gmail.com>  wrote:
>>
>>>     Hi,
>>>
>>>     I use
>>>
>>>     call KSPSetOptionsPrefix(ksp_semi_xyz,"momentum_",ierr)
>>>
>>>     and
>>>
>>>     call KSPSetOptionsPrefix(ksp,"poisson_",ierr)
>>>
>>>     so that I can choose separate ksp/pc options for my momentum and poisson equations through command line e.g.
>>>
>>>     -poisson_ksp_type gmres -poisson_pc_type hypre -poisson_pc_type_hypre boomeramg
>>>
>>>     In general, I need to use boomeramg as the preconditioner and gmres as the solver for my poisson eqn, separate from my momentum eqn, which has its own default pc and ksp. Is the above the correct way?
>>>
>>>     Thanks!
>>>
>>>     -- 
>>>     Yours sincerely,
>>>
>>>     TAY wee-beng
>>>
>
>
>
>
> -- 
> What most experimenters take for granted before they begin their 
> experiments is infinitely more interesting than any results to which 
> their experiments lead.
> -- Norbert Wiener

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