[petsc-users] with hdf5 dir

paul zhang paulhuaizhang at gmail.com
Wed Dec 17 08:58:17 CST 2014


Hi All,

I attempted to include hdf5 dir in my configuration, but failed.

--with-hdf5-dir=$HDF5PATH

I tried HDF5PATH=/share/cluster/SLES9/x86_64/apps/hdf5/1.8.3, but it shows

         UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for
details):
-------------------------------------------------------------------------------
--with-hdf5-dir=/share/cluster/SLES9/x86_64/apps/hdf5/1.8.3 did not work
*******************************************************************************


As I run $module show hdf5, I got

*-------------------------------------------------------------------*
*/usr/share/Modules/modulefiles/hdf5/1.8.3/icc/default:*

*module-whatis load HDF5 environment *
*prepend-path PATH /share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/bin *
*append-path LD_LIBRARY_PATH
/share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/lib *
*prepend-path MANPATH
/share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/share/man *
*setenv HDF_INCL /share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/include *
*-------------------------------------------------------------------*

What is my HDF5PATH?


Thanks,
Paul


Huaibao (Paul) Zhang
*Gas Surface Interactions Lab*
Department of Mechanical Engineering
University of Kentucky,
Lexington,
KY, 40506-0503
*Office*: 216 Ralph G. Anderson Building
*Web*:gsil.engineering.uky.edu
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