[petsc-users] compilation problems of ex1.c
Degang Wu
samuelandjw at gmail.com
Mon Mar 5 04:05:45 CST 2012
Hi,
I am new to petsc and slepc. Right now I am trying to compile ex1.c
(http://acts.nersc.gov/slepc/example1/ex1.c.html) in Eclipse. I
specified the paths of include files and libraries, but the
compiler/linker still complained about undefined references.
The following is the error message:
make all
Building file: ../ex1.c
Invoking: GCC C Compiler
gcc -I/usr/include/slepc -I/usr/include/petsc -I/usr/include/mpi -O0 -g3
-Wall -c -fmessage-length=0 -MMD -MP -MF"ex1.d" -MT"ex1.d" -o"ex1.o"
"../ex1.c"
Finished building: ../ex1.c
Building target: slepc-ex1
Invoking: GCC C Linker
gcc -L/usr/lib/slepc -L/usr/lib/petsc -o"slepc-ex1" ./ex1.o
./ex1.o: In function `main':
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:43: undefined reference
to `SlepcInitialize'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:45: undefined reference
to `PetscOptionsGetInt'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:45: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:46: undefined reference
to `PETSC_COMM_WORLD'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:46: undefined reference
to `PetscPrintf'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:46: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:52: undefined reference
to `PETSC_COMM_WORLD'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:52: undefined reference
to `MatCreate'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:52: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:53: undefined reference
to `MatSetSizes'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:53: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:54: undefined reference
to `MatSetFromOptions'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:54: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:56: undefined reference
to `MatGetOwnershipRange'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:56: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:62: undefined reference
to `MatSetValues'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:62: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:66: undefined reference
to `MatSetValues'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:66: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:70: undefined reference
to `MatSetValues'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:70: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:73: undefined reference
to `MatAssemblyBegin'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:73: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:74: undefined reference
to `MatAssemblyEnd'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:74: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:76: undefined reference
to `MatGetVecs'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:76: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:77: undefined reference
to `MatGetVecs'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:77: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:85: undefined reference
to `PETSC_COMM_WORLD'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:85: undefined reference
to `EPSCreate'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:85: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:90: undefined reference
to `EPSSetOperators'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:90: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:91: undefined reference
to `EPSSetProblemType'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:91: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:96: undefined reference
to `EPSSetFromOptions'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:96: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:102: undefined reference
to `EPSSolve'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:102: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:106: undefined reference
to `EPSGetIterationNumber'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:106: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:107: undefined reference
to `PETSC_COMM_WORLD'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:107: undefined reference
to `PetscPrintf'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:107: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:108: undefined reference
to `EPSGetType'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:108: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:109: undefined reference
to `PETSC_COMM_WORLD'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:109: undefined reference
to `PetscPrintf'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:109: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:110: undefined reference
to `EPSGetDimensions'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:110: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:111: undefined reference
to `PETSC_COMM_WORLD'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:111: undefined reference
to `PetscPrintf'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:111: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:112: undefined reference
to `EPSGetTolerances'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:112: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:113: undefined reference
to `PETSC_COMM_WORLD'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:113: undefined reference
to `PetscPrintf'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:113: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:121: undefined reference
to `EPSGetConverged'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:121: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:122: undefined reference
to `PETSC_COMM_WORLD'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:122: undefined reference
to `PetscPrintf'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:122: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:128: undefined reference
to `PETSC_COMM_WORLD'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:128: undefined reference
to `PetscPrintf'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:130: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:137: undefined reference
to `EPSGetEigenpair'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:137: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:141: undefined reference
to `EPSComputeRelativeError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:141: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:151: undefined reference
to `PETSC_COMM_WORLD'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:151: undefined reference
to `PetscPrintf'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:151: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:153: undefined reference
to `PETSC_COMM_WORLD'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:153: undefined reference
to `PetscPrintf'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:153: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:156: undefined reference
to `PETSC_COMM_WORLD'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:156: undefined reference
to `PetscPrintf'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:156: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:162: undefined reference
to `EPSDestroy'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:162: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:163: undefined reference
to `MatDestroy'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:163: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:164: undefined reference
to `VecDestroy'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:164: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:165: undefined reference
to `VecDestroy'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:165: undefined reference
to `PetscError'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:166: undefined reference
to `SlepcFinalize'
/home/wdg/Dropbox/dev/slepc-ex1/Debug/../ex1.c:166: undefined reference
to `PetscError'
collect2: ld returned 1 exit status
make: *** [slepc-ex1] Error 1
Regards,
Wu Degang
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