[petsc-users] MatView and PetscViewerASCIIOpen problem when cpu > 1
TAY wee-beng
zonexo at gmail.com
Mon Jun 25 16:18:30 CDT 2012
On 25/6/2012 3:40 PM, Jed Brown wrote:
> On Mon, Jun 25, 2012 at 12:25 PM, TAY wee-beng <zonexo at gmail.com
> <mailto:zonexo at gmail.com>> wrote:
>
> Hi,
>
> I'm trying to use DMDA to solve my linear equation.
>
> It works fine with 1 cpu. However, problem arise when cpu > 1. I
> get segmentation error.
>
> I tried to use MatView and PetscViewerASCIIOpen to view my matrix
> to check if it's correct.
>
> It works with 1 cpu. However now, it shows the error below when I
> use 2 cpu.
>
> [0]PETSC ERROR: --------------------- Error Message
> ------------------------------------
> [0]PETSC ERROR: Argument out of range!
> [0]PETSC ERROR: ASCII matrix output not allowed for matrices with
> more than 1024 rows, use binary format instead.
> You can override this restriction using -mat_ascii_output_large.!
>
> To view the matrix, my command is :
>
> call PetscViewerASCIIOpen(MPI_COMM_WORLD,"A_semi.txt",viewer,ierr)
>
> call MatView(A_semi,viewer,ierr)
>
> call PetscViewerDestroy(viewer,ierr)
>
> I tried to use -mat_ascii_output_large but then it just hangs
> there forever.
>
>
> It may just be very slow.
I tried using 1 cpu and I got it in a few minutes. Should i take a long
time if I use 2 cpu? Also, I got the error:
[0]PETSC ERROR: Argument out of range!
[0]PETSC ERROR: ASCII matrix output not allowed for matrices with more
than 1024 rows, use binary format instead.
It doesn't happen when I use 1 cpu. Is it normal to get it when I use 2 cpu?
I also tried to use :
call MatView(A_semi,PETSC_VIEWER_STDOUT_WORLD ,ierr)
but the same error occurs. It just hangs there when 2 cpu are used.
>
> Why do you need ASCII? Writing anything large in ASCII is hopeless.
> Please use binary.
>
> I create the matrix using DMCreateMatrix. I don't have to use
> MatCreateAIJ, right?
>
> Also, I check for the ierr value when I use MatSetValuesStencil to
> ensure there's no error. Btw There's no problem with VecView.
>
> So how can I view the matrix?
>
> Thank you!
>
> --
> Yours sincerely,
>
> TAY wee-beng
>
>
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