[petsc-users] matload big matrix
Barry Smith
bsmith at mcs.anl.gov
Sat Jun 2 13:17:31 CDT 2012
On Jun 2, 2012, at 12:31 PM, Wen Jiang wrote:
> Thanks for your reply.
>
> How long is it taking? What file system are you reading the matrix from?
>
> It seems to never finish. Sorry, I do not know what does the file system mean.
>
> What version of PETSc is this? How was the file generated? How many processes are you using? Does it work on less processes (like 1, 2 )? How many nonzeros in the matrix (roughly)?
>
> I am using 64 processes. The nonzeros in the matrix is around 8 billion.
>
> I am using PETSc dev. But the binary file was generated by PETSc 3.2 PetscViewerBinaryOpen(PETSC_COMM_WORLD,"l2projphim.dat",FILE_MODE_WRITE,&viewer). I just tried to use PETSc 3.2 to read and it had no problem. For a smaller matrix, PETSc dev successfully read the binary file generated by PETSc 3.2. But I do not know why it does not work for large matrix.
>
Are both PETSc's configured with --with-64-bit-indices?
Can you read it with fewer processes? Like 32 or 16?
barry
> Thanks,
>
> Regards,
> Wen
>
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