[petsc-users] HDF5 installation problems

Jed Brown jedbrown at mcs.anl.gov
Wed Feb 29 15:43:03 CST 2012


On Wed, Feb 29, 2012 at 15:35, Haren, S.W. van (Steven) <vanharen at nrg.eu>wrote:

> Dear all,
>
> I try to configure Petsc to use HDF5.
>
> During the HDF5 compilation stage the memory use increases untill the
> computer basically stalls and almost all memory is used. After 2500s the
> compilation is stopped because of a runaway process.
>

Check configure.log and/or attach a debugger to find out where it got
stuck. At least use "top" to find out which process is taking all the time
and memory.
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