[petsc-users] FW: Configuring PETSc with intel composer xe 2011, problem with libirc.a

Adam Stanier adam.stanier-2 at postgrad.manchester.ac.uk
Mon Aug 6 09:18:10 CDT 2012


I'm trying to configure PETSc 3.2-p7 with intel composer xe 2011 mpi libraries. This is the configure line I have been using:

./configure --with-cc=mpiicc --with-cxx=mpiicpc --with-fc=mpiifort --with-blas-lapack-dir=/usr/local/intel/composer_xe_2011_sp1.6.233/mkl/lib/intel64/ --with-blacs-lib=/usr/local/intel/composer_xe_2011_sp1.6.233/mkl/lib/intel64/libmkl_blacs_intelmpi_lp64.a --with-blacs-include=/usr/local/intel/composer_xe_2011_sp1.6.233/mkl/include --with-scalapack-lib=/usr/local/intel/composer_xe_2011_sp1.6.233/mkl/lib/intel64/libmkl_scalapack_lp64.a --with-scalapack-include=/usr/local/intel/composer_xe_2011_sp1.6.233/mkl/include --download-parmetis --download-mumps --download-superlu_dist --download-hypre --with-mpi-dir=/usr/local/intel/impi/ --with-debugging=0

This is fine for making PETSc, but when I try to run a code based on the PETSc libraries I get the following error:
./sel: symbol lookup error: ./sel: undefined symbol: __intel_sse2_strchr

I don't get this error when I set --with-debugging=1 with everything else the same.

Apparently this symbol should be within the libirc.a library. I notice that PETSc is looking in a folder for gcc for this library:

but I want to use the version within the intel lib directory:

Is there a way to do this? I couldn't find anything by searching.

Many Thanks,

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