[petsc-users] Could DMComposite handle two vectors with different grid sizes.

Barry Smith bsmith at mcs.anl.gov
Tue Jul 27 22:14:45 CDT 2010


  DMComposite doesn't say that the different DAs have to have the same dimensions, they can have different sizes, number of grid points etc

   Barry

On Jul 27, 2010, at 10:11 PM, (Rebecca) Xuefei YUAN wrote:

> Dear Barry,
> 
> I went over the mp1.c as the multi physics example. However, what I concerned is not addressed in that example. My concern is that will it be fine if the grid size for the different das are different.
> 
> The different grid sizes of da_A and da_B are coming from the fact that they share the same physical domain, but the computational domain are slightly different due to that problem A has the Neumann boundary condition (giving that the computational domain is half spacing extended from the physical domain, each point is expressed at the center of the cell) and problem B has the Dirichlet boundary condition (giving that the computational domain is the same as the physical domain, each point is expressed at the node of the cell.) Thus, problem A ALWAYS needs 1 more grid in each direction than problem B at each level.
> 
> If the coarsest grid has the difference 1(mA - mB = 1) in each direction, according to the algorithm for multigrid, the next finer level has the difference of ((2*mA-1) - (2*mB-1) = 2(mA-mB) = 2) in each direction, the next level has the difference of ((2*(2*mA-1)-1) - (2*(2*mB-1)-1) = 4*(mA-mB) = 4) in each direction. Because there is only half spacing being extended from the physical domain as the computational domain for problem A, the abandonNumber of grid is 1-1=0 for nl=1, 2-1=1 for nl=2 and 4-1=3 for nl=3.
> 
> To keep those extra points in the residual function and Jacobian, I applied the Neumann boundary condition for those points (mirror with the interior points).
> 
> Will this procedure be fine for such a multi physics problem?
> 
> Thanks very much!
> 
> Rebecca
> 
> 
> 
> 
> Quoting Barry Smith <bsmith at mcs.anl.gov>:
> 
>> 
>> 
>>   What you are doing below looks ok. This builds the DM and DMMG.   See tutorials/multiphysics/mp1.c for an example that uses SNES to  solve a nonlinear equation on the grids.
>> 
>>   Barry
>> 
>> 
>> 
>> On Jul 27, 2010, at 7:36 PM, (Rebecca) Xuefei YUAN wrote:
>> 
>>> Dear all,
>>> 
>>> If I have two different vectors (with different dof, stencil width  and grid sizes), could I use DMComposite to handle this?
>>> 
>>> The following is the piece of code for assemble this DMComposite in DMMG.
>>> 
>>> 	tempparameters.mxfield				= 5;
>>> 	tempparameters.myfield				= 5;
>>> 
>>> 	tempparameters.mxgrid	= tempparameters.mxfield+1;
>>> 	tempparameters.mygrid	= tempparameters.myfield+1;
>>> 
>>> 	ierr	= DMMGCreate(comm, tempparameters.numberOfLevels, &appCtx,  &dmmg);CHKERRQ(ierr);
>>> 
>>> 	ierr	= DMCompositeCreate(comm,&packer);CHKERRQ(ierr);
>>> 
>>> 	ierr	= DACreate2d(comm,DA_NONPERIODIC,DA_STENCIL_BOX,  tempparameters.mxfield, tempparameters.myfield, PETSC_DECIDE,  PETSC_DECIDE, 4, 3, PETSC_NULL, PETSC_NULL, &da_fff);CHKERRQ(ierr);
>>> 	ierr	= DASetFieldName(da_fff, 0, "phi");CHKERRQ(ierr);
>>> 	ierr	= DASetFieldName(da_fff, 1, "vz");CHKERRQ(ierr);
>>> 	ierr	= DASetFieldName(da_fff, 2, "psi");CHKERRQ(ierr);
>>> 	ierr	= DASetFieldName(da_fff, 3, "bz");CHKERRQ(ierr);
>>> 	ierr	= DACreate2d(comm,DA_NONPERIODIC,DA_STENCIL_BOX,  tempparameters.mxgrid, tempparameters.mygrid, PETSC_DECIDE,  PETSC_DECIDE, 1, tempparameters.gridStencilWidth, PETSC_NULL,  PETSC_NULL, &da_ggg);CHKERRQ(ierr);
>>> 	ierr	= DASetFieldName(da_ggg, 0, "disp");CHKERRQ(ierr);
>>> 
>>> 	ierr	= DMCompositeAddDM(packer,(DM)da_fff);CHKERRQ(ierr);
>>> 	ierr	= DMCompositeAddDM(packer,(DM)da_ggg);CHKERRQ(ierr);
>>> 	ierr	= DMCompositeAddArray(packer,0,1);CHKERRQ(ierr);
>>> 
>>> 	ierr	= DMMGSetDM(dmmg, (DM)packer);CHKERRQ(ierr);
>>> 
>>> 	ierr	= DADestroy(da_fff);CHKERRQ(ierr);
>>> 	ierr	= DADestroy(da_ggg);CHKERRQ(ierr);
>>> 
>>> .........................................................
>>> 
>>> 	ierr	= DMCompositeDestroy(packer);CHKERRQ(ierr);
>>> 	ierr	= DMMGDestroy(dmmg);CHKERRQ(ierr);
>>> 
>>> 
>>> I understand that for numberOfLevels(nl)>1, the grid size  difference is no longer 1, but 3(nl=2), 5(nl=3), could I use  DMComposite to handle such a case successfully?
>>> 
>>> I was not able to get examples for such a case, is there any?
>>> 
>>> Thanks a lot!
>>> 
>>> 
>>> 
>>> --
>>> (Rebecca) Xuefei YUAN
>>> Department of Applied Physics and Applied Mathematics
>>> Columbia University
>>> Tel:917-399-8032
>>> www.columbia.edu/~xy2102
>>> 
>> 
>> 
>> 
> 
> 
> 
> -- 
> (Rebecca) Xuefei YUAN
> Department of Applied Physics and Applied Mathematics
> Columbia University
> Tel:917-399-8032
> www.columbia.edu/~xy2102
> 



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