Installation petsc-3.0.0

[Satish Balay]

On Mon, 19 Jan 2009, Panyasantisuk Jarunan wrote:

> Hi,
> 
> I have upgraded Petsc to 3.0.0. For the configuration(1), which worked
> with petsc-2.3.3, I got C++ error. Anyway I could do make but make test
> failed for Fortran example(2).
> 
> Do you have any idea? I would be appreciate for any advise. Thank you
> very much.
> 
> Regards,
> Jarunan
> 
> - - - - (1) - - - -
> 
> ./config/configure.py --with-cc=/usr/local/mpich-ifc-ssh/bin/mpicc
> --with-fc=/usr/local/mpich-ifc-ssh/bin/mpif90
> --download-f-blas-lapack=1 --download-hypre=1 --download-ml=1
> --with-cxx=icpc --with-mpi-dir=/usr/local/mpich-ifc-ssh --with-shared=0

Perhaps you should be using '--with-cxx=/usr/local/mpich-ifc-ssh/bin/mpicxx' ?


> =================================================================================
>             Configuring PETSc to compile on your system
> =================================================================================
> =================================================================================
> Warning: [with-mpi-dir] option is used along with options: ['with-cc',
> 'with-fc', 'with-cxx']                                              This
> prevents configure from picking up MPI compilers from specified mpi-dir.
> Sugest using *only* [with-mpi-dir] option - and no other compiler option.
> This way - mpi compilers from /usr/local/mpich-ifc-ssh are used.
> =================================================================================
> TESTING: CxxMPICheck from
> config.packages.MPI(config/BuildSystem/config/packages/MPI.py:598)
> *********************************************************************************
>         UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log
> for details):
> ---------------------------------------------------------------------------------------
> C++ error! MPI_Finalize() could not be located!

Looks like configure did not complete. So how were you able to build
libraries and - run the tests?

If you still have isues - send the corresponding configure.log to
petsc-maint at mcs.anl.gov.

Satish

> 
> 
> 
> - - - - (2) - - - -
> 
> make test
> 
> Running test examples to verify correct installation
> C/C++ example src/snes/examples/tutorials/ex19 run successfully with 1
> MPI process
> C/C++ example src/snes/examples/tutorials/ex19 run successfully with 2
> MPI processes
> Graphics example src/snes/examples/tutorials/ex19 run successfully with
> 1 MPI process
> Error running Fortran example src/snes/examples/tutorials/ex5f with 1
> MPI process
> See http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html
> 0 - <NO ERROR MESSAGE> : Could not convert index 1140850688 into a pointer
> The index may be an incorrect argument.
> Possible sources of this problem are a missing "include 'mpif.h'",
> a misspelled MPI object (e.g., MPI_COM_WORLD instead of MPI_COMM_WORLD)
> or a misspelled user variable for an MPI object (e.g.,
> com instead of comm).
> [0]  Aborting program !
> [0] Aborting program!
> p0_31302:  p4_error: : 9039
> Completed test examples
> 
> --
> Jarunan PANYASANTISUK
> MSc. in Computational Mechanics
> Erasmus Mundus Master Program
> Ecole Centrale de Nantes
> 1, rue de la noë, 44321 NANTES, FRANCE
> 
> 
> 
> 
> 
>