MPICH error when using petsc-3.0.0-p4
Wee-Beng TAY
zonexo at gmail.com
Sun Apr 12 06:14:58 CDT 2009
Hi Satish,
I am now using the PETSc ex2f example. I tried "make ex2f" and manage to
build and run the file. Then I used the options as a reference for my
visual fortran and it worked.
The options are:
/compile_only /debug:full /include:"Debug/"
/include:"d:\cygwin\codes\petsc-3.0.0-p4\win32_mpi_debug\include"
/include:"d:\cygwin\codes\petsc-3.0.0-p4\include"
/include:"E:\cygwin\codes\MPICH\SDK\include" /nologo /threads
/warn:nofileopt /module:"Debug/" /object:"Debug/"
/pdbfile:"Debug/DF60.PDB" /fpp:"/m"
and
ws2_32.lib kernel32.lib user32.lib gdi32.lib winspool.lib comdlg32.lib
advapi32.lib shell32.lib ole32.lib oleaut32.lib uuid.lib odbc32.lib
odbccp32.lib libpetscts.lib libpetscsnes.lib libpetscksp.lib
libpetscdm.lib libpetscmat.lib libpetscvec.lib libpetsc.lib mpich.lib
libfblas.lib libflapack.lib /nologo /subsystem:console /incremental:yes
/pdb:"Debug/ex2f.pdb" /debug /machine:I386 /out:"Debug/ex2f.exe"
/pdbtype:sept
/libpath:"d:\cygwin\codes\petsc-3.0.0-p4\win32_mpi_debug\lib"
/libpath:"E:\cygwin\codes\MPICH\SDK\lib"
Now I add my own file called global.F and tried to compile, using the
same options.But now it failed. The error is:
--------------------Configuration: ex2f - Win32 Debug--------------------
Compiling Fortran...
------------------------------------------------------------------------
D:\cygwin\codes\petsc-3.0.0-p4\projects\fortran\ksp\ex2f\global.F:
7: #include "include/finclude/petsc.h"
^
** error on line 7 in D:\cygwin\codes\pets: cannot find file specified
in include directive.
8: #include "include/finclude/petscvec.h"
^
** error on line 8 in D:\cygwin\codes\pets: cannot find file specified
in include directive.
9: #include "include/finclude/petscmat.h"
^
** error on line 9 in D:\cygwin\codes\pets: cannot find file specified
in include directive.
10: #include "include/finclude/petscksp.h"
^
** error on line 10 in D:\cygwin\codes\pets: cannot find file
specified in include directive.
11: #include "include/finclude/petscpc.h"
^
** error on line 11 in D:\cygwin\codes\pets: cannot find file
specified in include directive.
12: #include "include/finclude/petscsys.h"
^
** error on line 12 in D:\cygwin\codes\pets: cannot find file
specified in include directive.
97: #include "include/finclude/petsc.h"
^
** error on line 97 in D:\cygwin\codes\pets: cannot find file
specified in include directive.
98: #include "include/finclude/petscvec.h"
^
** error on line 98 in D:\cygwin\codes\pets: cannot find file
specified in include directive.
99: #include "include/finclude/petscmat.h"
^
** error on line 99 in D:\cygwin\codes\pets: cannot find file
specified in include directive.
100: #include "include/finclude/petscksp.h"
^
** error on line 100 in D:\cygwin\codes\pets: cannot find file
specified in include directive.
101: #include "include/finclude/petscpc.h"
^
** error on line 101 in D:\cygwin\codes\pets: cannot find file
specified in include directive.
102: #include "include/finclude/petscsys.h"
^
** error on line 102 in D:\cygwin\codes\pets: cannot find file
specified in include directive.
global.i
D:\cygwin\codes\petsc-3.0.0-p4\projects\fortran\ksp\ex2f\global.F(65) :
Error: Syntax error, found ',' when expecting one of: ( : % . = =>
Vec xx,b_rhs,xx_uv,b_rhs_uv
-----------------^
D:\cygwin\codes\petsc-3.0.0-p4\projects\fortran\ksp\ex2f\global.F(67) :
Error: Syntax error, found ',' when expecting one of: ( : % . = =>
Mat A_mat,A_mat_uv ! /* sparse matrix */
--------------------^
D:\cygwin\codes\petsc-3.0.0-p4\projects\fortran\ksp\ex2f\global.F(69) :
Error: Syntax error, found ',' when expecting one of: ( : % . = =>
KSP ksp,ksp_uv !/* linear solver context */
-----------------^
D:\cygwin\codes\petsc-3.0.0-p4\projects\fortran\ksp\ex2f\global.F(71) :
Error: Syntax error, found ',' when expecting one of: ( : % . = =>
PC pc,pc_uv
------------------^
D:\cygwin\codes\petsc-3.0.0-p4\projects\fortran\ksp\ex2f\global.F(73) :
Error: Syntax error, found END-OF-STATEMENT when expecting one of: ( : %
. = =>
PCType ptype
-------------------------^
D:\cygwin\codes\petsc-3.0.0-p4\projects\fortran\ksp\ex2f\global.F(75) :
Error: Syntax error, found END-OF-STATEMENT when expecting one of: ( : %
. = =>
KSPType ksptype....
I can get it to compile if I use :
Debug/;d:\cygwin\codes\petsc-3.0.0-p4;d:\cygwin\codes\petsc-3.0.0-p4\include;d:\cygwin\codes\petsc-3.0.0-p4\win32_mpi_debug\include;E:\cygwin\codes\MPICH\SDK\include
Compared to the original one above which is:
Debug/;d:\cygwin\codes\petsc-3.0.0-p4\win32_mpi_debug\include;d:\cygwin\codes\petsc-3.0.0-p4\include;E:\cygwin\codes\MPICH\SDK\include
Hence, there is an additional "d:\cygwin\codes\petsc-3.0.0-p4"
I have attached my global.F. I wonder if this is the cause of the MPICH
error.
Currently, I have removed all other f90 files, except for global.F and
flux_area.f90. It's when I 'm compiling flux_area.f90 that I got the MPI
error stated below. I got the same error if I compile under cygwin using
the same parameters.
Hope you can help.
Thank you very much and have a nice day!
Yours sincerely,
Wee-Beng Tay
Satish Balay wrote:
> Do you get these errors with PETSc f90 examples?
>
> what 'USE statement' do you have in your code?
>
> I guess you'll have to check your code to see how you are using f90
> modules/includes.
>
> If you can get a minimal compileable code that can reproduce this
> error - send us the code so that we can reproduce the issue
>
> Satish
>
> On Thu, 9 Apr 2009, Wee-Beng TAY wrote:
>
>
>> Hi,
>>
>> I just built petsc-3.0.0-p4 with mpich and after that, I reinstalled my
>> windows xp and installed mpich in the same directory. I'm using CVF
>>
>> Now, I found that when I'm trying to compile my code, I got the error:
>>
>> :\cygwin\codes\MPICH\SDK\include\mpif.h(105) : Error: The attributes of this
>> name conflict with those made accessible by a USE statement.
>> [MPI_STATUS_SIZE]
>> INTEGER MPI_STATUS_IGNORE(MPI_STATUS_SIZE)
>> --------------------------------^
>> E:\cygwin\codes\MPICH\SDK\include\mpif.h(106) : Error: The attributes of this
>> name conflict with those made accessible by a USE statement.
>> [MPI_STATUS_SIZE]
>> INTEGER MPI_STATUSES_IGNORE(MPI_STATUS_SIZE)
>> ----------------------------------^
>> E:\cygwin\codes\petsc-3.0.0-p4\include/finclude/petsc.h(154) : Error: The
>> attributes of this name conflict with those made accessible by a USE
>> statement. [MPI_DOUBLE_PRECISION]
>> parameter(MPIU_SCALAR = MPI_DOUBLE_PRECISION)
>> ------------------------------^
>> Error executing df.exe.
>>
>> flux_area.obj - 3 error(s), 0 warning(s)
>>
>> My include option is :
>>
>> Debug/;$(PETSC_DIR);$(PETSC_DIR)\$(PETSC_ARCH)\;$(PETSC_DIR)\$(PETSC_ARCH)\include;$(PETSC_DIR)\include;E:\cygwin\codes\MPICH\SDK\include
>>
>>
>> Interestingly, when I change my PETSC_DIR to petsc-dev, which correspond to an
>> old build of petsc-2.3.3-p13, there is no problem.
>>
>> May I know what's wrong? Btw, I've converted my mpif.h from using "C" as
>> comments to "!".
>>
>> Thank you very much and have a nice day!
>>
>> Yours sincerely,
>>
>> Wee-Beng Tay
>>
>>
>>
>
>
>
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