x11 on os x 10.5.x
Gideon Simpson
grs2103 at columbia.edu
Sun Jun 22 13:55:05 CDT 2008
that fixed it. thanks.
-gideon
On Jun 22, 2008, at 12:25 PM, Barry Smith wrote:
>
> Please try editing python/PETSc/packages/X11.py and locate the line
> for ext in ['.a', '.so', '.sl', '.dll.a']:
> replace with
> for ext in ['.a', '.so', '.sl', '.dll.a','.dylib']:
>
> Barry
>
> Why this is not a PETSc patch I have no clue!
>
> On Jun 22, 2008, at 12:17 AM, Gideon Simpson wrote:
>
>> Does anyone know what flags to feed petsc 2.3.3 to get x11
>> functionality working with OS X 10.5.x? The following error shows
>> up in my configure log:
>>
>> TEST configureLibrary from PETSc.packages.X11(/opt/petsc-2.3.3-p13/
>> python/PETSc/packages/X11.py:93)
>> TESTING: configureLibrary from PETSc.packages.X11(python/PETSc/
>> packages/X11.py:93)
>> Checks for X windows, sets PETSC_HAVE_X11 if found, and defines
>> X_CFLAGS, X_PRE_LIBS, X_LIBS, and X_EXTRA_LIBS
>> sh: xmkmf
>> Executing: xmkmf
>> sh: imake -DUseInstalled -I/usr/X11/lib/X11/config
>>
>> sh: /usr/bin/make acfindx
>> Executing: /usr/bin/make acfindx
>> sh: X_INCLUDE_ROOT = /usr/X11/include
>> X_USR_LIB_DIR = /usr/X11/lib
>> X_LIB_DIR = /usr/X11/lib/X11
>>
>> Pushing language C
>> sh: /opt/bin/mpicc -c -o conftest.o -fPIC -Wall -Wwrite-strings -
>> Wno-strict-aliasing -g3 conftest.c
>> Executing: /opt/bin/mpicc -c -o conftest.o -fPIC -Wall -Wwrite-
>> strings -Wno-strict-aliasing -g3 conftest.c
>> sh:
>> Possible ERROR while running compiler: error message = {conftest.c:
>> In function ‘main’:
>> conftest.c:5: warning: implicit declaration of function ‘XSetWMName’
>> }
>> Source:
>> #include "confdefs.h"
>> #include "conffix.h"
>>
>> int main() {
>> XSetWMName();
>> ;
>> return 0;
>> }
>> Pushing language C
>> Popping language C
>> sh: /opt/bin/mpicc -o conftest -Wl,-multiply_defined,suppress -
>> Wl,-multiply_defined -Wl,suppress -Wl,-multiply_defined,suppress -
>> Wl,-multiply_defined -Wl,suppress -Wl,-multiply_defined,suppress -
>> Wl,-multiply_defined -Wl,suppress -fPIC -Wall -Wwrite-strings -Wno-
>> strict-aliasing -g3 conftest.o -Wl,-rpath,/usr/lib/i686-apple-
>> darwin9/4.2.1 -Wl,-rpath,/Library/Frameworks/Intel_MKL.framework/
>> Versions/10.0.2.018/lib/32 -Wl,-rpath,. -Wl,-rpath,/usr/lib/gcc/
>> i686-apple-darwin9/4.2.1 -Wl,-rpath,/usr/lib/gcc/i686-apple-
>> darwin9/4.2.1/../../../i686-apple-darwin9/4.2.1 -Wl,-rpath,/usr/lib/
>> gcc/i686-apple-darwin9/4.2.1/../../.. -lstdc++ -lcrt1.10.5.o -Wl,-
>> rpath,/usr/lib/i686-apple-darwin9/4.2.1 -L/usr/lib/i686-apple-
>> darwin9/4.2.1 -Wl,-rpath,/Library/Frameworks/Intel_MKL.framework/
>> Versions/10.0.2.018/lib/32 -L/Library/Frameworks/
>> Intel_MKL.framework/Versions/10.0.2.018/lib/32 -Wl,-rpath,. -L. -
>> Wl,-rpath,/usr/lib/gcc/i686-apple-darwin9/4.2.1 -L/usr/lib/gcc/i686-
>> apple-darwin9/4.2.1 -Wl,-rpath,/usr/lib/gcc/i686-apple-
>> darwin9/4.2.1/../../../i686-apple-darwin9/4.2.1 -L/usr/lib/gcc/i686-
>> apple-darwin9/4.2.1/../../../i686-apple-darwin9/4.2.1 -Wl,-rpath,/
>> usr/lib/gcc/i686-apple-darwin9/4.2.1/../../.. -L/usr/lib/gcc/i686-
>> apple-darwin9/4.2.1/../../.. -ldl -lgcc_s.10.5 -lSystem -ldl -lX11
>> Executing: /opt/bin/mpicc -o conftest -Wl,-
>> multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-
>> multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-
>> multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -fPIC
>> -Wall -Wwrite-strings -Wno-strict-aliasing -g3 conftest.o -Wl,-
>> rpath,/usr/lib/i686-apple-darwin9/4.2.1 -Wl,-rpath,/Library/
>> Frameworks/Intel_MKL.framework/Versions/10.0.2.018/lib/32 -Wl,-
>> rpath,. -Wl,-rpath,/usr/lib/gcc/i686-apple-darwin9/4.2.1 -Wl,-
>> rpath,/usr/lib/gcc/i686-apple-darwin9/4.2.1/../../../i686-apple-
>> darwin9/4.2.1 -Wl,-rpath,/usr/lib/gcc/i686-apple-
>> darwin9/4.2.1/../../.. -lstdc++ -lcrt1.10.5.o -Wl,-rpath,/usr/lib/
>> i686-apple-darwin9/4.2.1 -L/usr/lib/i686-apple-darwin9/4.2.1 -Wl,-
>> rpath,/Library/Frameworks/Intel_MKL.framework/Versions/10.0.2.018/
>> lib/32 -L/Library/Frameworks/Intel_MKL.framework/Versions/
>> 10.0.2.018/lib/32 -Wl,-rpath,. -L. -Wl,-rpath,/usr/lib/gcc/i686-
>> apple-darwin9/4.2.1 -L/usr/lib/gcc/i686-apple-darwin9/4.2.1 -Wl,-
>> rpath,/usr/lib/gcc/i686-apple-darwin9/4.2.1/../../../i686-apple-
>> darwin9/4.2.1 -L/usr/lib/gcc/i686-apple-darwin9/4.2.1/../../../i686-
>> apple-darwin9/4.2.1 -Wl,-rpath,/usr/lib/gcc/i686-apple-
>> darwin9/4.2.1/../../.. -L/usr/lib/gcc/i686-apple-
>> darwin9/4.2.1/../../.. -ldl -lgcc_s.10.5 -lSystem -ldl -lX11
>> sh:
>> Possible ERROR while running linker: ld: library not found for -lX11
>> collect2: ld returned 1 exit status
>> output: ret = 256
>> error message = {ld: library not found for -lX11
>> collect2: ld returned 1 exit status
>> }
>> Pushing language C
>> Popping language C
>> in /opt/bin/mpicc -o conftest -Wl,-multiply_defined,suppress -Wl,-
>> multiply_defined -Wl,suppress -Wl,-multiply_defined,suppress -Wl,-
>> multiply_defined -Wl,suppress -Wl,-multiply_defined,suppress -Wl,-
>> multiply_defined -Wl,suppress -fPIC -Wall -Wwrite-strings -Wno-
>> strict-aliasing -g3 conftest.o -Wl,-rpath,/usr/lib/i686-apple-
>> darwin9/4.2.1 -Wl,-rpath,/Library/Frameworks/Intel_MKL.framework/
>> Versions/10.0.2.018/lib/32 -Wl,-rpath,. -Wl,-rpath,/usr/lib/gcc/
>> i686-apple-darwin9/4.2.1 -Wl,-rpath,/usr/lib/gcc/i686-apple-
>> darwin9/4.2.1/../../../i686-apple-darwin9/4.2.1 -Wl,-rpath,/usr/lib/
>> gcc/i686-apple-darwin9/4.2.1/../../.. -lstdc++ -lcrt1.10.5.o -Wl,-
>> rpath,/usr/lib/i686-apple-darwin9/4.2.1 -L/usr/lib/i686-apple-
>> darwin9/4.2.1 -Wl,-rpath,/Library/Frameworks/Intel_MKL.framework/
>> Versions/10.0.2.018/lib/32 -L/Library/Frameworks/
>> Intel_MKL.framework/Versions/10.0.2.018/lib/32 -Wl,-rpath,. -L. -
>> Wl,-rpath,/usr/lib/gcc/i686-apple-darwin9/4.2.1 -L/usr/lib/gcc/i686-
>> apple-darwin9/4.2.1 -Wl,-rpath,/usr/lib/gcc/i686-apple-
>> darwin9/4.2.1/../../../i686-apple-darwin9/4.2.1 -L/usr/lib/gcc/i686-
>> apple-darwin9/4.2.1/../../../i686-apple-darwin9/4.2.1 -Wl,-rpath,/
>> usr/lib/gcc/i686-apple-darwin9/4.2.1/../../.. -L/usr/lib/gcc/i686-
>> apple-darwin9/4.2.1/../../.. -ldl -lgcc_s.10.5 -lSystem -ldl -lX11
>> Source:
>> #include "confdefs.h"
>> #include "conffix.h"
>>
>> int main() {
>> XSetWMName();
>> ;
>> return 0;
>> }
>> Popping language C
>> Could not find X11 libraries
>>
>
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