Multilevel solver
Amit.Itagi at seagate.com
Amit.Itagi at seagate.com
Thu Apr 24 08:58:48 CDT 2008
Barry,
I have been trying out the PCFIELDSPLIT. I have not yet gotten it to work.
I have some follow up questions which might help solve my problem.
Consider the simple case of a 4x4 matrix equation being solved on two
processes. I have vector elements 0 and 1 belonging to rank 0, and elements
2 and 3 belonging to rank 1.
1) For my example, can the index sets have staggered indices i.e. is1-> 0,2
and is2->1,3 (each is spans across ranks) ?
2) When I provide the -field_split_<n>_pc_type option on the command line,
is the index <n> in the same order that the PCFieldSplitSetIS function
called in ?
So if I have PCFieldSplitSetIS(pc,is2) before
PCFieldSplitSetIS(pc,is1), will -field_split_0_... correspond to is2 and
-field_split_1_... to is1 ?
3) Since I want to set PC type to lu for field 0, and I want to use MUMPS
for parallel LU, where do I set the submatrix type to MATAIJMUMPS ? In this
case, will a second copy of the submatrix be generated - one of type MUMPS
for the PC and the other of the original MATAIJ type for the KSP ?
4) How is the PC applied when I do PC_COMPOSITE_SYMMETRIC_MULTIPLICATIVE ?
Thanks
Rgds,
Amit
Barry Smith
<bsmith at mcs.anl.g
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Available Re: Multilevel solver
04/22/2008 10:08
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Amit,
Using a a PCSHELL should be fine (it can be used with GMRES),
my guess is there is a memory corruption error somewhere that is
causing the crash. This could be tracked down with www.valgrind.com
Another way to you could implement this is with some very recent
additions I made to PCFIELDSPLIT that are in petsc-dev
(http://www-unix.mcs.anl.gov/petsc/petsc-as/developers/index.html)
With this you would chose
PCSetType(pc,PCFIELDSPLIT
PCFieldSplitSetIS(pc,is1
PCFieldSplitSetIS(pc,is2
PCFieldSplitSetType(pc,PC_COMPOSITE_SYMMETRIC_MULTIPLICATIVE
to use LU on A11 use the command line options
-fieldsplit_0_pc_type lu -fieldsplit_0_ksp_type preonly
and SOR on A22
-fieldsplit_1_pc_type sor -fieldsplit_1_ksp_type preonly -
fieldsplit_1_pc_sor_lits <lits> where
<its> is the number of iterations you want to use block A22
is1 is the IS that contains the indices for all the vector entries in
the 1 block while is2 is all indices in the
vector for the 2 block. You can use ISCreateGeneral() to create these.
Probably it is easiest just to try this out.
Barry
On Apr 22, 2008, at 8:45 PM, Amit.Itagi at seagate.com wrote:
>
> Hi,
>
> I am trying to implement a multilevel method for an EM problem. The
> reference is : "Comparison of hierarchical basis functions for
> efficient
> multilevel solvers", P. Ingelstrom, V. Hill and R. Dyczij-Edlinger,
> IET
> Sci. Meas. Technol. 2007, 1(1), pp 48-52.
>
> Here is the summary:
>
> The matrix equation Ax=b is solved using GMRES with a multilevel
> pre-conditioner. A has a block structure.
>
> A11 A12 * x1 = b1
> A21 A22 x2 b2
>
> A11 is mxm and A33 is nxn, where m is not equal to n.
>
> Step 1 : Solve A11 * e1 = b1 (parallel LU using
> superLU or
> MUMPS)
>
> Step 2: Solve A22 * e2 =b2-A21*e1 (might either user
> a SOR
> solver or a parallel LU)
>
> Step 3: Solve A11* e1 = b1-A12*e2 (parallel LU)
>
> This gives the approximate solution to
>
> A11 A12 * e1 = b1
> A21 A22 e2 b2
>
> and is used as the pre-conditioner for the GMRES.
>
>
> Which PetSc method can implement this pre-conditioner ? I tried a
> PCSHELL
> type PC. With Hong's help, I also got the parallel LU to work
> withSuperLU/MUMPS. My program runs successfully on multiple
> processes on a
> single machine. But when I submit the program over multiple
> machines, I get
> a crash in the PCApply routine after several GMRES iterations. I
> think this
> has to do with using PCSHELL with GMRES (which is not a good idea). Is
> there a different way to implement this ? Does this resemble the usage
> pattern of one of the AMG preconditioners ?
>
>
> Thanks
>
> Rgds,
> Amit
>
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