in the test compilation
Pilhwa Lee
leep at cims.nyu.edu
Thu Jun 15 11:41:41 CDT 2006
Here's the log file.
Thanks, Pilhwa
On Thu, 2006-06-15 at 11:35 -0500, Satish Balay wrote:
> Its likely there were problems with the build of libraries.
> Can you send us this logfile?
>
> Satish
>
> On Thu, 15 Jun 2006, Pilhwa Lee wrote:
>
> > Hi Satish,
> >
> > Based on PETSc-2.1.6, I'm using SAMRAI.
> >
> > I get the following result.
> >
> >
> >
> > /home/leep/petsc-2.1.6/lib/libg/linux64/libpetscfortran.a:zstartf.o:
> > U petscsetcommonblock_
> >
> >
> >
> >
> > Thanks, Pilhwa
> >
> >
> >
> > On Thu, 2006-06-15 at 11:13 -0500, Satish Balay wrote:
> > > Why use petsc-2.1.6 instead of the latest 2.3.1?
> > >
> > > What do you have for:
> > >
> > > nm -Ao /home/leep/petsc-2.1.6/lib/libg/linux64/*.a |grep -i petscsetcommonblock
> > >
> > > Satish
> > >
> > >
> > > On Thu, 15 Jun 2006, Pilhwa Lee wrote:
> > >
> > > > Hi,
> > > >
> > > > I'm in the stage of testing compilation of an example. I'm using PETSc
> > > > 2.1.6. In the course of compilation
> > > > of /petsc-2.1.6/src/vec/examples/tutorials/ex11f.F, the following errors
> > > > comes up. If any of you have some idea for solution, let me know please.
> > > >
> > > > thanks, Pilhwa
> > > >
> > > > the content of the log
> > > > --------------------------------------------------------------------
> > > > g77 -Wno-globals -c -g -I/home/leep/petsc-2.1.6 -
> > > > I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -
> > > > I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -
> > > > DPETSC_USE_BOPT_g -DPETSC_USE_STACK ex11f.F
> > > > g77 -g -Wl,-rpath,/home/leep/petsc-2.1.6/lib/libg/linux64 -o ex11f
> > > > ex11f.o -L/home/leep/petsc-2.1.6/lib/libg/linux64 -lpetscfortran -
> > > > L/home/leep/petsc-2.1.6/lib/libg/linux64 -lpetscvec -lpetsc
> > > > -L/usr/X11R6/lib64 -lX11
> > > > -L/usr/lib64 -llapack -lblas -L/home/leep/mpich/lib -lmpich -lpmpich -
> > > > ldl -lc -lg2c -lm
> > > > /usr/lib/gcc/x86_64-redhat-linux/3.4.5/../../../../lib64/crt1.o(.text
> > > > +0x21): In function `_start':
> > > > : undefined reference to `main'
> > > > /home/leep/petsc-2.1.6/lib/libg/linux64/libpetscfortran.a
> > > > (zstartf.o)(.text+0x4f): In function `PetscInitializeFortran':
> > > > /home/leep/petsc-2.1.6/src/fortran/custom/zstartf.c:58: undefined
> > > > reference to `petscsetcommonblock_'
> > > > collect2: ld returned 1 exit status
> > > > make: [ex11f] Error 1 (ignored)
> > > > rm -f -f ex11f.o
> > > > ------------------------------------------------------------------------
> > > >
> > > >
> > > >
> > > >
> > > >
> > >
> >
> >
>
-------------- next part --------------
make[1]: Entering directory `/home/leep/petsc-2.1.6'
==========================================
See docs/troubleshooting.html and docs/bugreporting.html
for help with installation problems. Please send EVERYTHING
printed out below when reporting problems
To subscribe to the PETSc users mailing list, send mail to
majordomo at mcs.anl.gov with the message:
subscribe petsc-announce
==========================================
On Thu Jun 15 11:10:01 EDT 2006 on box106.cims.nyu.edu
Machine characteristics: Linux box106.cims.nyu.edu 2.6.9-5.ELsmp #1 SMP Wed Jan 5 19:29:47 EST 2005 x86_64 x86_64 x86_64 GNU/Linux
-----------------------------------------
Using C compiler: gcc -fPIC -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK -D__SDIR__='. '
C Compiler version: gcc (GCC) 3.4.5 20051201 (Red Hat 3.4.5-2) Copyright (C) 2004 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
Using C++ compiler: g++ -fPIC -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK -D__SDIR__='. '
C++ Compiler version: g++ (GCC) 3.4.5 20051201 (Red Hat 3.4.5-2) Copyright (C) 2004 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
Using Fortran compiler: g77 -Wno-globals -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK
Fortran Compiler version: GNU Fortran (GCC) 3.4.5 20051201 (Red Hat 3.4.5-2)
-----------------------------------------
PETSC_VERSION_MAJOR 2
PETSC_VERSION_MINOR 1
PETSC_VERSION_SUBMINOR 6
PETSC_VERSION_PATCH 0
PETSC_VERSION_DATE "Aug 05, 2003"
-----------------------------------------
Using PETSc flags: -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK
-----------------------------------------
Using configuration flags:
#define INCLUDED_PETSCCONF_H
#define PARCH_linux
#define PETSC_ARCH_NAME "linux"
#define PETSC_HAVE_POPEN
#define PETSC_HAVE_LIMITS_H
#define PETSC_HAVE_PWD_H
#define PETSC_HAVE_MALLOC_H
#define PETSC_HAVE_STRING_H
#define PETSC_HAVE_GETDOMAINNAME
#define PETSC_HAVE_DRAND48
#define PETSC_HAVE_UNAME
#define PETSC_HAVE_UNISTD_H
#define PETSC_HAVE_SYS_TIME_H
#define PETSC_HAVE_STDLIB_H
#define PETSC_HAVE_GETCWD
#define PETSC_HAVE_SLEEP
#define PETSC_HAVE_SYS_PARAM_H
#define PETSC_HAVE_SYS_STAT_H
#define PETSC_HAVE_FORTRAN_UNDERSCORE
#define PETSC_HAVE_FORTRAN_UNDERSCORE_UNDERSCORE
#define PETSC_HAVE_READLINK
#define PETSC_HAVE_MEMMOVE
#define PETSC_HAVE_DOUBLE_ALIGN_MALLOC
#define PETSC_HAVE_MEMALIGN
#define PETSC_HAVE_SYS_RESOURCE_H
#define PETSC_SIZEOF_VOID_P 8
#define PETSC_SIZEOF_INT 4
#define PETSC_SIZEOF_DOUBLE 8
#define PETSC_BITS_PER_BYTE 8
#define PETSC_SIZEOF_FLOAT 4
#define PETSC_SIZEOF_LONG 8
#define PETSC_SIZEOF_LONG_LONG 8
#define PETSC_HAVE_RTLD_GLOBAL 1
#define PETSC_PRINTF_FORMAT_CHECK(a,b) __attribute__ ((format (printf, a,b)))
#define PETSC_HAVE_SYS_UTSNAME_H
#define PETSC_MISSING_SIGSYS
#define PETSC_HAVE_CXX_NAMESPACE
-----------------------------------------
Using include paths: -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include
-----------------------------------------
Using PETSc directory: /home/leep/petsc-2.1.6
Using PETSc arch: linux64
------------------------------------------
Using C linker: gcc -g -Wl,-rpath,/home/leep/petsc-2.1.6/lib/libg/linux64
Using Fortran linker: g77 -g -Wl,-rpath,/home/leep/petsc-2.1.6/lib/libg/linux64
Using libraries: -L/home/leep/petsc-2.1.6/lib/libg/linux64 -lpetscgsolver -lpetscgrid -lpetscmesh -lpetscts -lpetscsnes -lpetscsles -lpetscdm -lpetscmat -lpetscvec -lpetsc -L/usr/X11R6/lib64 -lX11 -L/usr/lib64 -llapack -lblas -L/home/leep/mpich/lib -lmpich -lpmpich -ldl -lc -lg2c -lm
------------------------------------------
Using mpirun: /home/leep/mpich/bin/mpirun
==========================================
rm -f -f /home/leep/petsc-2.1.6/lib/libg/linux64/*
BEGINNING TO COMPILE LIBRARIES IN ALL DIRECTORIES
=========================================
libfast in: /home/leep/petsc-2.1.6/src
libfast in: /home/leep/petsc-2.1.6/src/inline
libfast in: /home/leep/petsc-2.1.6/src/sys
libfast in: /home/leep/petsc-2.1.6/src/sys/src
libfast in: /home/leep/petsc-2.1.6/src/sys/src/viewer
libfast in: /home/leep/petsc-2.1.6/src/sys/src/viewer/impls
libfast in: /home/leep/petsc-2.1.6/src/sys/src/viewer/impls/socket
libfast in: /home/leep/petsc-2.1.6/src/sys/src/viewer/impls/ascii
libfast in: /home/leep/petsc-2.1.6/src/sys/src/viewer/impls/binary
libfast in: /home/leep/petsc-2.1.6/src/sys/src/viewer/impls/string
libfast in: /home/leep/petsc-2.1.6/src/sys/src/viewer/impls/draw
libfast in: /home/leep/petsc-2.1.6/src/sys/src/viewer/impls/vu
libfast in: /home/leep/petsc-2.1.6/src/sys/src/viewer/impls/mathematica
libfast in: /home/leep/petsc-2.1.6/src/sys/src/viewer/impls/silo
libfast in: /home/leep/petsc-2.1.6/src/sys/src/viewer/examples
libfast in: /home/leep/petsc-2.1.6/src/sys/src/viewer/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/sys/src/viewer/examples/tests
libfast in: /home/leep/petsc-2.1.6/src/sys/src/viewer/interface
libfast in: /home/leep/petsc-2.1.6/src/sys/src/draw
libfast in: /home/leep/petsc-2.1.6/src/sys/src/draw/interface
libfast in: /home/leep/petsc-2.1.6/src/sys/src/draw/impls
libfast in: /home/leep/petsc-2.1.6/src/sys/src/draw/impls/ps
libfast in: /home/leep/petsc-2.1.6/src/sys/src/draw/examples
libfast in: /home/leep/petsc-2.1.6/src/sys/src/draw/examples/tests
libfast in: /home/leep/petsc-2.1.6/src/sys/src/draw/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/sys/src/draw/utils
libfast in: /home/leep/petsc-2.1.6/src/sys/src/error
libfast in: /home/leep/petsc-2.1.6/src/sys/src/dll
libfast in: /home/leep/petsc-2.1.6/src/sys/src/fileio
libfast in: /home/leep/petsc-2.1.6/src/sys/src/memory
libfast in: /home/leep/petsc-2.1.6/src/sys/src/objects
libfast in: /home/leep/petsc-2.1.6/src/sys/src/objects/ams
libfast in: /home/leep/petsc-2.1.6/src/sys/src/time
libfast in: /home/leep/petsc-2.1.6/src/sys/src/utils
libfast in: /home/leep/petsc-2.1.6/src/sys/src/plog
libfast in: /home/leep/petsc-2.1.6/src/sys/src/mpiuni
libfast in: /home/leep/petsc-2.1.6/src/sys/examples
libfast in: /home/leep/petsc-2.1.6/src/sys/examples/tests
libfast in: /home/leep/petsc-2.1.6/src/sys/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/vec
libfast in: /home/leep/petsc-2.1.6/src/vec/is
libfast in: /home/leep/petsc-2.1.6/src/vec/is/interface
libfast in: /home/leep/petsc-2.1.6/src/vec/is/impls
libfast in: /home/leep/petsc-2.1.6/src/vec/is/impls/general
libfast in: /home/leep/petsc-2.1.6/src/vec/is/impls/stride
libfast in: /home/leep/petsc-2.1.6/src/vec/is/impls/block
libfast in: /home/leep/petsc-2.1.6/src/vec/is/examples
libfast in: /home/leep/petsc-2.1.6/src/vec/is/examples/tests
libfast in: /home/leep/petsc-2.1.6/src/vec/is/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/vec/is/utils
libfast in: /home/leep/petsc-2.1.6/src/vec/utils
libfast in: /home/leep/petsc-2.1.6/src/vec/interface
libfast in: /home/leep/petsc-2.1.6/src/vec/impls
libfast in: /home/leep/petsc-2.1.6/src/vec/impls/seq
libfast in: /home/leep/petsc-2.1.6/src/vec/impls/mpi
libfast in: /home/leep/petsc-2.1.6/src/vec/impls/shared
libfast in: /home/leep/petsc-2.1.6/src/vec/examples
libfast in: /home/leep/petsc-2.1.6/src/vec/examples/tests
libfast in: /home/leep/petsc-2.1.6/src/vec/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/mat
libfast in: /home/leep/petsc-2.1.6/src/mat/interface
libfast in: /home/leep/petsc-2.1.6/src/mat/impls
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/dense
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/dense/seq
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/dense/mpi
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/aij
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/aij/seq
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/aij/mpi
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/shell
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/bdiag
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/bdiag/seq
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/bdiag/mpi
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/baij
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/baij/seq
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/baij/mpi
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/adj
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/adj/mpi
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/maij
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/is
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/sbaij
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/sbaij/seq
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/sbaij/mpi
libfast in: /home/leep/petsc-2.1.6/src/mat/impls/normal
libfast in: /home/leep/petsc-2.1.6/src/mat/examples
libfast in: /home/leep/petsc-2.1.6/src/mat/examples/tests
libfast in: /home/leep/petsc-2.1.6/src/mat/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/mat/utils
libfast in: /home/leep/petsc-2.1.6/src/mat/matfd
libfast in: /home/leep/petsc-2.1.6/src/mat/partition
libfast in: /home/leep/petsc-2.1.6/src/mat/partition/impls
libfast in: /home/leep/petsc-2.1.6/src/mat/order
libfast in: /home/leep/petsc-2.1.6/src/mat/color
libfast in: /home/leep/petsc-2.1.6/src/sles
libfast in: /home/leep/petsc-2.1.6/src/sles/interface
libfast in: /home/leep/petsc-2.1.6/src/sles/pc
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/interface
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/jacobi
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/none
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/sor
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/lu
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/shell
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/bjacobi
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/mg
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/eisens
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/ilu
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/icc
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/asm
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/sles
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/composite
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/redundant
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/milu
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/is
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/is/nn
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/cholesky
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/pbjacobi
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/ml
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/schur
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/impls/mat
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/examples
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/examples/tests
libfast in: /home/leep/petsc-2.1.6/src/sles/pc/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/interface
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/cr
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/bcgs
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/cg
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/cgs
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/gmres
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/cheby
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/rich
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/lsqr
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/preonly
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/tcqmr
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/tfqmr
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/qcg
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/bicg
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/fgmres
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/minres
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/symmlq
libfast in: /home/leep/petsc-2.1.6/src/sles/ksp/impls/lgmres
libfast in: /home/leep/petsc-2.1.6/src/sles/examples
libfast in: /home/leep/petsc-2.1.6/src/sles/examples/tests
libfast in: /home/leep/petsc-2.1.6/src/sles/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/sles/utils
libfast in: /home/leep/petsc-2.1.6/src/snes
libfast in: /home/leep/petsc-2.1.6/src/snes/interface
libfast in: /home/leep/petsc-2.1.6/src/snes/interface/noise
libfast in: /home/leep/petsc-2.1.6/src/snes/mf
libfast in: /home/leep/petsc-2.1.6/src/snes/impls
libfast in: /home/leep/petsc-2.1.6/src/snes/impls/ls
libfast in: /home/leep/petsc-2.1.6/src/snes/impls/tr
libfast in: /home/leep/petsc-2.1.6/src/snes/impls/test
libfast in: /home/leep/petsc-2.1.6/src/snes/impls/ml
libfast in: /home/leep/petsc-2.1.6/src/snes/examples
libfast in: /home/leep/petsc-2.1.6/src/snes/examples/tests
libfast in: /home/leep/petsc-2.1.6/src/snes/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/snes/examples/tutorials/ex10d
libfast in: /home/leep/petsc-2.1.6/src/snes/utils
libfast in: /home/leep/petsc-2.1.6/src/ts
libfast in: /home/leep/petsc-2.1.6/src/ts/interface
libfast in: /home/leep/petsc-2.1.6/src/ts/impls
libfast in: /home/leep/petsc-2.1.6/src/ts/impls/explicit
libfast in: /home/leep/petsc-2.1.6/src/ts/impls/explicit/euler
libfast in: /home/leep/petsc-2.1.6/src/ts/impls/explicit/rk
libfast in: /home/leep/petsc-2.1.6/src/ts/impls/implicit
libfast in: /home/leep/petsc-2.1.6/src/ts/impls/implicit/beuler
libfast in: /home/leep/petsc-2.1.6/src/ts/impls/implicit/cn
libfast in: /home/leep/petsc-2.1.6/src/ts/impls/pseudo
libfast in: /home/leep/petsc-2.1.6/src/ts/examples
libfast in: /home/leep/petsc-2.1.6/src/ts/examples/tests
libfast in: /home/leep/petsc-2.1.6/src/ts/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/dm
libfast in: /home/leep/petsc-2.1.6/src/dm/ao
libfast in: /home/leep/petsc-2.1.6/src/dm/ao/interface
libfast in: /home/leep/petsc-2.1.6/src/dm/ao/impls
libfast in: /home/leep/petsc-2.1.6/src/dm/ao/impls/basic
libfast in: /home/leep/petsc-2.1.6/src/dm/ao/impls/mapping
libfast in: /home/leep/petsc-2.1.6/src/dm/ao/examples
libfast in: /home/leep/petsc-2.1.6/src/dm/ao/examples/tests
libfast in: /home/leep/petsc-2.1.6/src/dm/ao/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/dm/ao/utils
libfast in: /home/leep/petsc-2.1.6/src/dm/da
libfast in: /home/leep/petsc-2.1.6/src/dm/da/src
libfast in: /home/leep/petsc-2.1.6/src/dm/da/examples
libfast in: /home/leep/petsc-2.1.6/src/dm/da/examples/tests
libfast in: /home/leep/petsc-2.1.6/src/dm/da/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/dm/da/utils
libfast in: /home/leep/petsc-2.1.6/src/dm/usg
libfast in: /home/leep/petsc-2.1.6/src/dm/usg/utils
libfast in: /home/leep/petsc-2.1.6/src/mesh
libfast in: /home/leep/petsc-2.1.6/src/mesh/interface
libfast in: /home/leep/petsc-2.1.6/src/mesh/impls
libfast in: /home/leep/petsc-2.1.6/src/mesh/impls/triangular
libfast in: /home/leep/petsc-2.1.6/src/mesh/impls/triangular/1d
libfast in: /home/leep/petsc-2.1.6/src/mesh/impls/triangular/2d
libfast in: /home/leep/petsc-2.1.6/src/mesh/order
libfast in: /home/leep/petsc-2.1.6/src/mesh/examples
libfast in: /home/leep/petsc-2.1.6/src/mesh/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/grid
libfast in: /home/leep/petsc-2.1.6/src/grid/interface
libfast in: /home/leep/petsc-2.1.6/src/grid/impls
libfast in: /home/leep/petsc-2.1.6/src/grid/impls/triangular
libfast in: /home/leep/petsc-2.1.6/src/grid/impls/triangular/1d
libfast in: /home/leep/petsc-2.1.6/src/grid/impls/triangular/2d
libfast in: /home/leep/petsc-2.1.6/src/grid/discretization
libfast in: /home/leep/petsc-2.1.6/src/grid/discretization/interface
libfast in: /home/leep/petsc-2.1.6/src/grid/discretization/impls
libfast in: /home/leep/petsc-2.1.6/src/grid/discretization/impls/triangular
libfast in: /home/leep/petsc-2.1.6/src/grid/discretization/impls/triangular/1d
libfast in: /home/leep/petsc-2.1.6/src/grid/discretization/impls/triangular/1d/constant
libfast in: /home/leep/petsc-2.1.6/src/grid/discretization/impls/triangular/1d/linear
libfast in: /home/leep/petsc-2.1.6/src/grid/discretization/impls/triangular/1d/quadratic
libfast in: /home/leep/petsc-2.1.6/src/grid/discretization/impls/triangular/2d
libfast in: /home/leep/petsc-2.1.6/src/grid/discretization/impls/triangular/2d/linear
libfast in: /home/leep/petsc-2.1.6/src/grid/discretization/impls/triangular/2d/quadratic
libfast in: /home/leep/petsc-2.1.6/src/gvec
libfast in: /home/leep/petsc-2.1.6/src/gvec/interface
libfast in: /home/leep/petsc-2.1.6/src/gvec/impls
libfast in: /home/leep/petsc-2.1.6/src/gvec/impls/triangular
libfast in: /home/leep/petsc-2.1.6/src/gvec/impls/triangular/2d
libfast in: /home/leep/petsc-2.1.6/src/gsolver
libfast in: /home/leep/petsc-2.1.6/src/gsolver/interface
libfast in: /home/leep/petsc-2.1.6/src/gsolver/impls
libfast in: /home/leep/petsc-2.1.6/src/gsolver/impls/gbeuler
libfast in: /home/leep/petsc-2.1.6/src/gsolver/impls/jacobic
libfast in: /home/leep/petsc-2.1.6/src/gsolver/examples
libfast in: /home/leep/petsc-2.1.6/src/gsolver/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/contrib
libfast in: /home/leep/petsc-2.1.6/src/contrib/sda
libfast in: /home/leep/petsc-2.1.6/src/contrib/sda/examples
libfast in: /home/leep/petsc-2.1.6/src/contrib/sda/examples/tests
libfast in: /home/leep/petsc-2.1.6/src/contrib/sda/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/contrib/sda/src
libfast in: /home/leep/petsc-2.1.6/src/contrib/oberman
libfast in: /home/leep/petsc-2.1.6/src/contrib/oberman/laplacian_q1
libfast in: /home/leep/petsc-2.1.6/src/contrib/oberman/laplacian_q1/scalable
libfast in: /home/leep/petsc-2.1.6/src/contrib/oberman/burgers_vertex_based_q1
libfast in: /home/leep/petsc-2.1.6/src/contrib/oberman/burgers_df_based_q1
libfast in: /home/leep/petsc-2.1.6/src/contrib/oberman/ns_q1q0
libfast in: /home/leep/petsc-2.1.6/src/contrib/oberman/ns_q2q1
libfast in: /home/leep/petsc-2.1.6/src/contrib/lahaye
libfast in: /home/leep/petsc-2.1.6/src/contrib/libtfs
libfast in: /home/leep/petsc-2.1.6/src/contrib/adic
libfast in: /home/leep/petsc-2.1.6/src/contrib/adic/adic
libfast in: /home/leep/petsc-2.1.6/src/contrib/adic/adintrinsics
libfast in: /home/leep/petsc-2.1.6/src/contrib/adic/Gradient
libfast in: /home/leep/petsc-2.1.6/src/benchmarks
libfast in: /home/leep/petsc-2.1.6/src/pf
libfast in: /home/leep/petsc-2.1.6/src/pf/interface
libfast in: /home/leep/petsc-2.1.6/src/pf/impls
libfast in: /home/leep/petsc-2.1.6/src/pf/impls/constant
libfast in: /home/leep/petsc-2.1.6/src/pf/impls/string
libfast in: /home/leep/petsc-2.1.6/src/pf/examples
libfast in: /home/leep/petsc-2.1.6/src/pf/examples/tutorials
libfast in: /home/leep/petsc-2.1.6/src/fortran
libfast in: /home/leep/petsc-2.1.6/src/fortran/auto
libfast in: /home/leep/petsc-2.1.6/src/fortran/custom
libfast in: /home/leep/petsc-2.1.6/src/fortran/fsrc
g77 -Wno-globals -c -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK somefort.F
/home/leep/mpich/include/mpif.h: In subroutine `petscsetcommonblock':
/home/leep/mpich/include/mpif.h:192:
PARAMETER (MPI_ADDRESS_KIND=)
^
Expression at (^) has incorrect data type or rank for its context
/home/leep/mpich/include/mpif.h:193:
PARAMETER (MPI_OFFSET_KIND=)
^
Expression at (^) has incorrect data type or rank for its context
make[7]: [somefort.o] Error 1 (ignored)
ar cr /home/leep/petsc-2.1.6/lib/libg/linux64/libpetscfortran.a somefort.o
ar: somefort.o: No such file or directory
make[7]: *** [libf] Error 1
libfast in: /home/leep/petsc-2.1.6/src/fortran/kernels
g77 -Wno-globals -c -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK fmaxpy.F
g77 -Wno-globals -c -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK fmdot.F
g77 -Wno-globals -c -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK fnorm.F
g77 -Wno-globals -c -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK fmult.F
g77 -Wno-globals -c -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK fmultadd.F
g77 -Wno-globals -c -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK fsolve.F
g77 -Wno-globals -c -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK fsolvebaij.F
g77 -Wno-globals -c -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK sgemv.F
g77 -Wno-globals -c -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK frelax.F
g77 -Wno-globals -c -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK fwaxpy.F
g77 -Wno-globals -c -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK faypx.F
g77 -Wno-globals -c -g -I/home/leep/petsc-2.1.6 -I/home/leep/petsc-2.1.6/bmake/linux64 -I/home/leep/petsc-2.1.6/include -I/home/leep/mpich/include -DPETSC_USE_DEBUG -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK fcopy.F
ar cr /home/leep/petsc-2.1.6/lib/libg/linux64/libpetsc.a fmaxpy.o fmdot.o fnorm.o fmult.o fmultadd.o fsolve.o fsolvebaij.o sgemv.o frelax.o fwaxpy.o faypx.o fcopy.o
libfast in: /home/leep/petsc-2.1.6/include
libfast in: /home/leep/petsc-2.1.6/include/finclude
libfast in: /home/leep/petsc-2.1.6/include/f90impl
libfast in: /home/leep/petsc-2.1.6/docs
Completed building libraries
=========================================
making shared libraries in /home/leep/petsc-2.1.6/lib/libg/linux64
building libpetsccontrib.so
building libpetsc.so
/usr/bin/ld: fsolvebaij.o: relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
fsolvebaij.o: could not read symbols: Bad value
collect2: ld returned 1 exit status
building libpetscmat.so
/usr/bin/ld: /home/leep/mpich/lib/libmpich.a(isend.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
/home/leep/mpich/lib/libmpich.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
building libpetscsles.so
/usr/bin/ld: /home/leep/mpich/lib/libmpich.a(isend.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
/home/leep/mpich/lib/libmpich.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
building libpetscsnes.so
/usr/bin/ld: /home/leep/mpich/lib/libmpich.a(comm_size.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
/home/leep/mpich/lib/libmpich.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
building libpetscts.so
/usr/bin/ld: /home/leep/mpich/lib/libmpich.a(commcompare.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
/home/leep/mpich/lib/libmpich.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
building libpetscvec.so
/usr/bin/ld: /home/leep/mpich/lib/libmpich.a(isend.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
/home/leep/mpich/lib/libmpich.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
building libpetscdm.so
/usr/bin/ld: /home/leep/mpich/lib/libmpich.a(send.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
/home/leep/mpich/lib/libmpich.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
building libpetscmesh.so
/usr/bin/ld: /home/leep/mpich/lib/libmpich.a(comm_rank.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
/home/leep/mpich/lib/libmpich.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
building libpetscgrid.so
/usr/bin/ld: /home/leep/mpich/lib/libmpich.a(send.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
/home/leep/mpich/lib/libmpich.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
building libpetscgsolver.so
/usr/bin/ld: /home/leep/mpich/lib/libmpich.a(comm_rank.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
/home/leep/mpich/lib/libmpich.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
make[1]: Leaving directory `/home/leep/petsc-2.1.6'
More information about the petsc-users
mailing list