Configuration crash - can't start new thread

Satish Balay balay at mcs.anl.gov
Tue Dec 5 22:49:25 CST 2006


This is wierd. I don't think we've seen this error before. What kind
of linux is this running? I'm guessing there is a problem on the
system-software side.. [with threads]

Satish

On Wed, 6 Dec 2006, Ben Tay wrote:

> Hi,
> 
> sorry, it still can't work. Installation of Python is ok though.
> 
> the error msg is the same though:
> 
> 
> =================================================================================
>             Configuring PETSc to compile on your
> system
> =================================================================================
> *********************************************************************************
>          CONFIGURATION CRASH  (Please send configure.log to
> petsc-maint at mcs.anl.gov)
> *********************************************************************************
> 
> can't start new thread
>  File "config/configure.py", line 172, in petsc_configure
>    framework = config.framework.Framework(sys.argv[1:]+['--configModules=
> PETSc.Configure','--optionsModule=PETSc.compilerOptions'], loadArgDB = 0)
>  File
> "/nas/hpctmp/g0306332/petsc-2.3.2-p7/python/BuildSystem/config/framework.py",
> line 81, in __init__
>    self.argDB['debugSections'] = ['screen']
>  File "/nas/hpctmp/g0306332/petsc-2.3.2-p7/python/BuildSystem/RDict.py",
> line 219, in __setitem__
>    self.save()
>  File "/nas/hpctmp/g0306332/petsc-2.3.2-p7/python/BuildSystem/RDict.py",
> line 639, in save
>    self.saveTimer.start()
>  File "/nas/home/enduser/g0306332/python-2.4/lib/python2.5/threading.py",
> line 434, in start
>    _start_new_thread(self.__bootstrap, ())
> 
> 
> 
> 
> 
> 
> 
> On 12/6/06, Satish Balay <balay at mcs.anl.gov> wrote:
> > 
> > What linux is this? Just get python sources from http://python.org/
> > [sugest python-2.4] - and install your own copy - and try with it.
> > 
> > configure python with:
> > ./configure --prefix=${HOME}/python-2.4
> > make
> > make install
> > 
> > And configure PETSc with:
> > ${HOME}/python-2.4/bin/python config/configure.py
> > 
> > Satish
> > 
> > 
> > On Wed, 6 Dec 2006, Ben Tay wrote:
> > 
> > > Hi,
> > >
> > > I just tried but it's the same error. Any other suggestion?
> > >
> > > thanks!
> > >
> > >
> > >
> > >
> > > On 12/5/06, Matthew Knepley <knepley at gmail.com> wrote:
> > > >
> > > > You have a broken Python installation. You can work around this using
> > > > the options --useThreads=0.
> > > >
> > > > Thanks,
> > > >
> > > >    Matt
> > > >
> > > > On 12/5/06, Ben Tay <zonexo at gmail.com> wrote:
> > > > > Hi,
> > > > >
> > > > > I tried to compile the library on a linux sys (xeon). It gives the
> > error
> > > > > msg:
> > > > >
> > > > >
> > > > >
> > > > >
> > > >
> > *********************************************************************************
> > > > >           CONFIGURATION CRASH  (Please send configure.log to
> > > > > petsc-maint at mcs.anl.gov)
> > > > >
> > > >
> > *********************************************************************************
> > > > >
> > > > > can't start new thread
> > > > >
> > > > >   File "./config/configure.py", line 172, in petsc_configure
> > > > >     framework =
> > > > > config.framework.Framework(sys.argv[1:]+['--configModules=
> > > > PETSc.Configure','--optionsModule=PETSc.compilerOptions'],
> > > > > loadArgDB = 0)
> > > > >   File
> > > > > "/nas/hpctmp/g0306332/petsc-2.3.2-p7
> > > > /python/BuildSystem/config/framework.py",
> > > > > line 81, in __init__
> > > > >     self.argDB['debugSections'] = ['screen']
> > > > >   File "/nas/hpctmp/g0306332/petsc-2.3.2-p7
> > > > /python/BuildSystem/RDict.py",
> > > > > line 219, in __setitem__
> > > > >     self.save()
> > > > >   File "/nas/hpctmp/g0306332/petsc-2.3.2-p7
> > > > /python/BuildSystem/RDict.py",
> > > > > line 639, in save
> > > > >     self.saveTimer.start()
> > > > >   File "/usr/lib/python2.2/threading.py", line 396, in
> > > > > start
> > > > >     _start_new_thread(self.__bootstrap, ())
> > > > >
> > > > >
> > > > > May I know what's wrong? I also can't find any configure.log file.
> > > > >
> > > > > Thank you.
> > > > >
> > > > > Regards
> > > >
> > > >
> > > > --
> > > > "Failure has a thousand explanations. Success doesn't need one" -- Sir
> > > > Alec Guiness
> > > >
> > > >
> > >
> > 
> > 
> 




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