[petsc-dev] Infinite loop in A*B
Zhang, Hong
hzhang at mcs.anl.gov
Sun Feb 28 22:33:00 CST 2021
I can reproduce the hang with
mpiexec -n 2 ./matmatmult
It seems in an infinite loop of calling MatDensePlaceArray() from
#0 MatDensePlaceArray (mat=0xda5c50, array=0xd15e60)
at /home/hongsu/soft/petsc/src/mat/impls/dense/mpi/mpidense.c:2047
#1 0x00007fa0d13bf4f7 in MatDenseGetSubMatrix_SeqDense (A=0xcfb2b0, cbegin=0,
cend=0, v=0xd90370)
at /home/hongsu/soft/petsc/src/mat/impls/dense/seq/dense.c:2997
#2 0x00007fa0d13c574e in MatDenseGetSubMatrix (A=0xcfb2b0, cbegin=0, cend=0,
v=0xd90370) at /home/hongsu/soft/petsc/src/mat/impls/dense/seq/dense.c:3371
#3 0x00007fa0d13db5ce in MatDenseGetSubMatrix_MPIDense (A=0xca5250, cbegin=0,
cend=0, v=0x7ffe87d41de0)
at /home/hongsu/soft/petsc/src/mat/impls/dense/mpi/mpidense.c:1835
#4 0x00007fa0d13c574e in MatDenseGetSubMatrix (A=0xca5250, cbegin=0, cend=0,
v=0x7ffe87d41de0)
at /home/hongsu/soft/petsc/src/mat/impls/dense/seq/dense.c:3371
#5 0x00007fa0d179c2fa in MatMatMultNumeric_MPIAIJ_MPIDense (A=0xc55490,
B=0xca5250, C=0xd282b0)
at /home/hongsu/soft/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c:593
#6 0x00007fa0d1181331 in MatProductNumeric_AB (mat=0xd282b0)
at /home/hongsu/soft/petsc/src/mat/interface/matproduct.c:567
#7 0x00007fa0d1182c14 in MatProductNumeric (mat=0xd282b0)
at /home/hongsu/soft/petsc/src/mat/interface/matproduct.c:679
#8 0x00007fa0d115ef69 in MatProduct_Private (A=0xc55490, B=0xca5250,
scall=MAT_INITIAL_MATRIX, fill=-2, ptype=MATPRODUCT_AB, C=0x7ffe87d42018)
at /home/hongsu/soft/petsc/src/mat/interface/matrix.c:9405
---Type <return> to continue, or q <return> to quit---
#9 0x00007fa0d115f274 in MatMatMult (A=0xc55490, B=0xca5250, scall=MAT_INITIAL_MATRIX, fill=-2,
C=0x7ffe87d42018) at /home/hongsu/soft/petsc/src/mat/interface/matrix.c:9445
#10 0x000000000040130a in main (argc=2, argv=0x7ffe87d42108) at ex1.c:20
I'll try to figure out what is going on. If anyone has a clue, please help. The above stack comes from 'release' branch.
Hong
________________________________
From: petsc-dev <petsc-dev-bounces at mcs.anl.gov> on behalf of Pierre Jolivet <pierre at joliv.et>
Sent: Sunday, February 28, 2021 4:17 PM
To: For users of the development version of PETSc <petsc-dev at mcs.anl.gov>
Subject: [petsc-dev] Infinite loop in A*B
Hello,
The following MWE loops indefinitely for MPI_Comm_size in {2; 3}.
Nothing fancy, just MatAIJ and MatDense.
The problem is either in MatMPIDenseScatter() or MatMatMultSymbolic_MPIAIJ_MPIDense(), I believe, so if someone familiar with those routines can figure out a hot fix, I’m all ears.
I could of course switch to a MatMult(), but the same infinite loop happens in another more complex code with
A = rows=8, cols=35212
B = rows=35212, cols=9
So I’ll need a fix eventually.
Thanks,
Pierre
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20210301/502dfe11/attachment.html>
More information about the petsc-dev
mailing list