[petsc-dev] Multiple MPICH/fblaslapack Installs For Multiple Arches

Jacob Faibussowitsch jacob.fai at gmail.com
Sun Mar 22 16:31:09 CDT 2020


> Yes on all points regarding MPI and BLAS/Lapack.  I recommend installing
> a current MPICH and/or Open MPI system-wide, preferably hooked up to
> ccache (see replies to this thread:
> https://lists.mcs.anl.gov/pipermail/petsc-dev/2020-January/025505.html <https://lists.mcs.anl.gov/pipermail/petsc-dev/2020-January/025505.html>),
> as well as BLAS/Lapack system-wide.  It's the other packages that are
> more likely to depend on int/scalar configuration, but even many of
> those (HDF5, SuiteSparse, etc.) aren't built specially for PETSc.

Is the home-brew MPICH, openblas, lapack sufficient here? Or is it recommended to build all three from source?

Best regards,

Jacob Faibussowitsch
(Jacob Fai - booss - oh - vitch)
Cell: (312) 694-3391

> On Mar 22, 2020, at 4:25 PM, Jed Brown <jed at jedbrown.org> wrote:
> 
> Jacob Faibussowitsch <jacob.fai at gmail.com <mailto:jacob.fai at gmail.com>> writes:
> 
>> Hello all,
>> 
>> As part of development, I have several arch folders lying around in my PETSC_DIR namely a 32-bit OSX, 64-bit OSX, 32-bit linux with valgrind, 64-bit linux with valgrind, and a 32-bit up to date with current master. All of these have a —download-mpich —download-fblaslapack and hence their own copy of each (so that’s 5 copies of each, plus other duplicated packages im sure). At this stage, even getting the bare minimum of these arches ready for dev work after a rebase/git pull takes decades as package versions, or conf settings change, forcing a rebuild of the same packages multiple times.
>> 
>> My question(s):
>> What petsc ./configure options are necessary to change the
>> configuration of each library w.r.t. petsc? i.e. can my 64-bit arches
>> use my 32-bit MPICH/fblaslapack and vice-versa? 
> 
> Yes on all points regarding MPI and BLAS/Lapack.  I recommend installing
> a current MPICH and/or Open MPI system-wide, preferably hooked up to
> ccache (see replies to this thread:
> https://lists.mcs.anl.gov/pipermail/petsc-dev/2020-January/025505.html <https://lists.mcs.anl.gov/pipermail/petsc-dev/2020-January/025505.html>),
> as well as BLAS/Lapack system-wide.  It's the other packages that are
> more likely to depend on int/scalar configuration, but even many of
> those (HDF5, SuiteSparse, etc.) aren't built specially for PETSc.
> 
>> Does this change when I have —with-debug on or off? If so, what other
>> packages have a similar ability? Is there anywhere in ./configure
>> —help where this kind of information would be documented?
>> 
>> I suspect that this hasn’t been fully explored since its primarily a developer “problem” and not one the average user will run into/care about (since they usually aren’t building petsc multiple times). I’m sure everyone has their own ways of tackling this problem, I’d love to hear them.
>> 
>> Best regards,
>> 
>> Jacob Faibussowitsch
>> (Jacob Fai - booss - oh - vitch)
>> Cell: (312) 694-3391

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