[petsc-dev] CUDA STREAMS

Mark Adams mfadams at lbl.gov
Wed Oct 2 09:20:50 CDT 2019


I found a CUDAVersion.cu of STREAMS and tried to build it. I got it to
compile manually with:

nvcc -o CUDAVersion.o -ccbin pgc++
-I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.4/spectrum-mpi-10.3.0.1-20190611-4ymaahbai7ehhw4rves5jjiwon2laz3a/include
-Wno-deprecated-gpu-targets -c --compiler-options="-g
-I/ccs/home/adams/petsc/include
-I/ccs/home/adams/petsc/arch-summit-opt64-pgi-cuda/include   "
`pwd`/CUDAVersion.cu
/gpfs/alpine/geo127/scratch/adams/CUDAVersion.cu(22): warning: conversion
from a string literal to "char *" is deprecated
 ....

And this did produce a .o file. But I get this when I try to link.

make -f makestreams CUDAVersion
mpicc -g -fast  -o CUDAVersion CUDAVersion.o
-Wl,-rpath,/ccs/home/adams/petsc/arch-summit-opt64-pgi-cuda/lib
-L/ccs/home/adams/petsc/arch-summit-opt64-pgi-cuda/lib
-Wl,-rpath,/ccs/home/adams/petsc/arch-summit-opt64-pgi-cuda/lib
-L/ccs/home/adams/petsc/arch-summit-opt64-pgi-cuda/lib
/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.4-6acz4xyqjlpoaonjiiqjme2aknrfnzoy/linuxpower/19.4/lib/pgi.ld
-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.4/spectrum-mpi-10.3.0.1-20190611-4ymaahbai7ehhw4rves5jjiwon2laz3a/lib
-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.4/spectrum-mpi-10.3.0.1-20190611-4ymaahbai7ehhw4rves5jjiwon2laz3a/lib
-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.4-6acz4xyqjlpoaonjiiqjme2aknrfnzoy/linuxpower/19.4/lib
-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.4-6acz4xyqjlpoaonjiiqjme2aknrfnzoy/linuxpower/19.4/lib
-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5
-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lpetsc -llapack -lblas
-lparmetis -lmetis -lstdc++ -ldl -lpthread -lmpiprofilesupport
-lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -lpgf90rtl -lpgf90 -lpgf90_rpm1
-lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt
-lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl
CUDAVersion.o: In function `setupStream(long, PetscBool, PetscBool)':
/gpfs/alpine/geo127/scratch/adams/CUDAVersion.cu:394: undefined reference
to `cudaGetDeviceCount'
/gpfs/alpine/geo127/scratch/adams/CUDAVersion.cu:406: undefined reference
to `cudaSetDevice'
 ....

I have compared this link line with working examples and it looks the same.
There is not .c file here -- main is in the .cu file. I assume that is the
difference.

Any ideas?
Thanks,
Mark
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