[petsc-dev] BuildSystem: how to prevent 'make clean' before 'make'

Blaise A Bourdin bourdin at lsu.edu
Wed Nov 29 17:34:44 CST 2017


Thanks.

I understand that it is not optimal. But OTOH, you are also assuming that make clean does what it is supposed to do…

Blaise


> On Nov 29, 2017, at 5:29 PM, Satish Balay <balay at mcs.anl.gov> wrote:
> 
> Right now there is no provision for this. The following can add it.
> 
> 
>>>>>>>>> 
> $ git diff
> diff --git a/config/BuildSystem/config/package.py b/config/BuildSystem/config/package.py
> index 14de19502b..f9a2e68a25 100644
> --- a/config/BuildSystem/config/package.py
> +++ b/config/BuildSystem/config/package.py
> @@ -80,6 +80,7 @@ class Package(config.base.Configure):
>     self.makerulename           = '' # some packages do too many things with the make stage; this allows a package to limit to, for example, just building the libraries
>     self.installedpetsc         = 0
>     self.installwithbatch       = 0  # install the package even though configure is running in the initial batch mode; f2blaslapack and fblaslapack for example
> +    self.skipcleanbeforebuild   = 0  # skip running 'make clean' before starting a fresh build of a package
>     return
> 
>   def __str__(self):
> @@ -1322,7 +1323,8 @@ class GNUPackage(Package):
>       if self.parallelMake: pmake = self.make.make_jnp+' '+self.makerulename+' '
>       else: pmake = self.make.make+' '+self.makerulename+' '
> 
> -      output2,err2,ret2  = config.base.Configure.executeShellCommand('cd '+self.packageDir+' && '+self.make.make+' clean', timeout=200, log = self.log)
> +      if not self.skipcleanbeforebuild:
> +        output2,err2,ret2  = config.base.Configure.executeShellCommand('cd '+self.packageDir+' && '+self.make.make+' clean', timeout=200, log = self.log)
>       output3,err3,ret3  = config.base.Configure.executeShellCommand('cd '+self.packageDir+' && '+pmake, timeout=6000, log = self.log)
>       self.logPrintBox('Running make install on '+self.PACKAGE+'; this may take several minutes')
>       self.installDirProvider.printSudoPasswordMessage(self.installSudo)
> <<<<<<<<
> 
> But then - a dirty build dir might break subsequent builds with the same PETSC_ARCH [usually triggered when configure options change]
> 
> Satish
> 
> On Wed, 29 Nov 2017, Blaise A Bourdin wrote:
> 
>> Hi,
>> 
>> I am trying to get BuildSystem to build pnetcdf (parallel netcdf automatically).
>> The build process is very straightforward (configure; make; make install)
>> Looking at other packages, I came up with the following for $PETSC_DIR/config/BuildSystem/config/packages/pnetcdf.py
>> 
>> import config.package
>> import os
>> 
>> class Configure(config.package.GNUPackage):
>>  def __init__(self, framework):
>>    config.package.Package.__init__(self, framework)
>>    self.download          = ['http://cucis.ece.northwestern.edu/projects/PnetCDF/Release/parallel-netcdf-1.8.1.tar.gz']
>>    self.functions         = ['ncmpi_create']
>>    self.includes          = ['pnetcdf.h']
>>    self.liblist           = [['libpnetcdf.a']]
>>    self.downloaddirnames  = ['parallel-netcdf-1.8.1']
>>    return
>> 
>>  def setupDependencies(self, framework):
>>    config.package.GNUPackage.setupDependencies(self, framework)
>>    self.mpi   = framework.require('config.packages.MPI', self)
>>    self.deps  = [self.mpi]
>>    return
>> 
>>  def formGNUConfigureArgs(self):
>>    args = config.package.GNUPackage.formGNUConfigureArgs(self)
>>    args.append('LIBS="'+self.compilers.LIBS+'"')
>>    return args
>> 
>> 
>> Looking at configure.log, it looks like BuildSystem does a make clean between configure and make
>> Unfortunately, there must be something wrong with the parallel-netcdf makefile, as make clean erases some of the files generated by pkgconfig (?), so that make install later fails...
>> 
>> Is there an easy way to skip the 'make clean' step? 
>> 
>> Blaise
>> 
>> 
>> 
>> 
> 

-- 
Department of Mathematics and Center for Computation & Technology
Louisiana State University, Baton Rouge, LA 70803, USA
Tel. +1 (225) 578 1612, Fax  +1 (225) 578 4276 http://www.math.lsu.edu/~bourdin









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