[petsc-dev] Possible error running C/C++ src/snes/examples/tutorials/ex19 with 1 MPI process

Satish Balay balay at mcs.anl.gov
Sat Oct 8 16:00:48 CDT 2016


On Sat, 8 Oct 2016, Antonio Trande wrote:

> On 10/08/2016 05:57 PM, Antonio Trande wrote:
> > This is a rebuild of OpenBlas outside Fedora repositories, so they're
> > unofficial packages; i have included optimization flags +
> > '-fdefault-integer-8' for 64bit-int libs:
> > 
> > Fedora 24 packages:
> > https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00462441-openblas/
> > 
> > Build log:
> > https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00462441-openblas/build.log.gz
> > 
> > Then, i have rebuilt Petsc by linking against unofficial recompiled
> > Openblas libs; build log:
> > https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00462470-petsc/build.log.gz
> > 
> > Extracted section about testing: https://paste.fedoraproject.org/446212/
> > 
> > PS.
> > Does not appear any error if running 'make test' on my PC.
> > 
> 
> This is the log from a debugging build:
> https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-rawhide-x86_64/00462512-petsc/build.log.gz
> 
> 

Previously you had a build where these errors didn't come up

https://paste.fedoraproject.org/445643/

But now the build gives errors.

>>>>>
Running test examples to verify correct installation
Using PETSC_DIR=/builddir/build/BUILD/petsc-3.7.3/petsc-3.7.3 and PETSC_ARCH=x86_64
Possible error running C/C++ src/snes/examples/tutorials/ex19 with 1 MPI process
See http://www.mcs.anl.gov/petsc/documentation/faq.html
[0]PETSC ERROR: #1 PetscLogInitialize() line 219 in /builddir/build/BUILD/petsc-3.7.3/petsc-3.7.3/src/sys/logging/plog.c
[0]PETSC ERROR: #2 PetscInitialize() line 891 in /builddir/build/BUILD/petsc-3.7.3/petsc-3.7.3/src/sys/objects/pinit.c
Possible error running C/C++ src/snes/examples/tutorials/ex19 with 2 MPI processes
<<<<<<<

Looks like we discussed this issue before:

http://lists.mcs.anl.gov/pipermail/petsc-users/2016-June/029634.html

The key is to make sure the correct petsc.so and petscconf.h are used
in the test [with the way this build is being done, and stuff getting
copied arround - the makefiles that do 'make test' might have invalid
info..]

Perhaps you can rerun this via valgraind again to see what it says.


Satish



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