[petsc-dev] PETSc configuration with Cray MPI

[Barry Smith]

  send configure.log to petsc-maint at mcs.anl.gov   This email address cannot handle such large files.


> On Mar 24, 2016, at 8:30 PM, Hector E Barrios Molano <hectorb at utexas.edu> wrote:
> 
> Hi Experts!
> 
> I'm trying to configure PETSc on a system with Cray mpich. I got the following configure message:
> 
> ===============================================================================
>              Configuring PETSc to compile on your system                       
> ===============================================================================
> TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146)                                                                                                                       *******************************************************************************
>          UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for details):
> -------------------------------------------------------------------------------
> Unable to find mpi in default locations!
> Perhaps you can specify with --with-mpi-dir=<directory>
> If you do not want MPI, then give --with-mpi=0
> You might also consider using --download-mpich instead
> *******************************************************************************
> 
> Initially I was using the option --with-mpi-dir but configure script told me that it did not work.
> 
> 
> This is the configure command that I am using:
> 
> ./configure --prefix=/work/03341/hector/lonestar/installed/petsc3.6-intel-debug --PETSC_DIR=/work/03341/hector/lonestar/sources/petsc-master --PETSC_ARCH=haswell-debug --with-batch --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-parmetis-dir=/work/03341/hector/lonestar/installed/parmetis/ --with-metis-dir=/work/03341/hector/lonestar/installed/parmetis/ --download-ptscotch --download-hypre --with-blas-lapack-lib=[/work/03341/hector/lonestar/mkl_static/libmkl_intel_lp64.a,/work/03341/hector/lonestar/mkl_static/libmkl_core.a,/work/03341/hector/lonestar/mkl_static/libmkl_intel_thread.a] --with-scalapack-include=/opt/apps/intel/16.0.1.150/compilers_and_libraries_2016.1.150/linux/mkl/include/ --with-scalapack-lib=[/work/03341/hector/lonestar/mkl_static/libmkl_scalapack_lp64.a,/work/03341/hector/lonestar/mkl_static/libmkl_blacs_intelmpi_lp64.a] --with-valgrind=1 --with-valgrind-dir=/work/03341/hector/lonestar/installed/ --with-shared-libraries=0 --with-fortran-interfaces=1 --FC_LINKER_FLAGS="-openmp -openmp-link static" --FFLAGS="-openmp -openmp-link static" --LIBS="-Wl,--start-group /work/03341/hector/lonestar/mkl_static/libmkl_intel_lp64.a /work/03341/hector/lonestar/mkl_static/libmkl_core.a /work/03341/hector/lonestar/mkl_static/libmkl_intel_thread.a -Wl,--end-group -ldl -lpthread -lm" 
> 
> 
> Do you have any idea on how to solve the problem?
> 
> Thanks for your help!
> 
> Best regards,
> 
> Hector