[petsc-dev] freebsd breakage

Tobin Isaac tisaac at ices.utexas.edu
Tue Sep 8 14:26:35 CDT 2015


I've pushed a fix and merged it into next that I think should work.

My changes also exposed a bug in SAWS configuration: I've pushed a
pull request to that repo that should fix it.  If you accept it, I'll
bump the version in --download-saws.

  Toby

On Tue, Sep 08, 2015 at 11:28:16AM -0500, Barry Smith wrote:
> 
>   Toby,
> 
>      This must be your pull request causing grief.
> 
>   Barry
> 
> > On Sep 8, 2015, at 11:23 AM, Satish Balay <balay at mcs.anl.gov> wrote:
> > 
> > http://ftp.mcs.anl.gov/pub/petsc/nightlylogs/archive/2015/09/08/configure_next_arch-freebsd-cxx-pkgs-opt_wii.log
> > http://ftp.mcs.anl.gov/pub/petsc/nightlylogs/archive/2015/09/08/configure_next_arch-freebsd-pkgs-opt_wii.log
> > 
> > https://bitbucket.org/petsc/petsc/commits/e1450d8053bc869c6cfb945a2ea6dba10cadf607 is triggering this.
> > 
> > sept-3: ================================================================================
> > TEST checkSharedLinker from config.setCompilers(/usr/home/balay/petsc.clone-2/config/BuildSystem/config/setCompilers.py:1246)
> > TESTING: checkSharedLinker from config.setCompilers(/usr/home/balay/petsc.clone-2/config/BuildSystem/config/setCompilers.py:1246)
> >  Check that the linker can produce shared libraries
> > Executing: uname -s
> > stdout: FreeBSD
> >                              Checking shared linker /usr/home/balay/petsc.clone-2/arch-freebsd-cxx-pkgs-opt/bin/mpicxx using flags ['-shared']
> > Checking for program /usr/home/balay/petsc.clone-2/arch-freebsd-cxx-pkgs-opt/bin/mpicxx...found
> >                                  Defined make macro "LD_SHARED" to "/usr/home/balay/petsc.clone-2/arch-freebsd-cxx-pkgs-opt/bin/mpicxx"
> > Executing: /usr/home/balay/petsc.clone-2/arch-freebsd-cxx-pkgs-opt/bin/mpicc -c -o /tmp/petsc-GagEyB/config.setCompilers/conftest.o -I/tmp/petsc-GagEyB/config.compilers -I/tmp/petsc-GagEyB/config.utilities.closure -I/tmp/petsc-GagEyB/config.headers -I/tmp/petsc-GagEyB/config.utilities.cacheDetails -I/tmp/petsc-GagEyB/config.types -I/tmp/petsc-GagEyB/config.atomics -I/tmp/petsc-GagEyB/config.utilities.getResidentSetSize -I/tmp/petsc-GagEyB/config.libraries -I/tmp/petsc-GagEyB/config.utilities.featureTestMacros -I/tmp/petsc-GagEyB/config.utilities.missing -I/tmp/petsc-GagEyB/config.setCompilers -I/tmp/petsc-GagEyB/config.functions  -fPIC  /tmp/petsc-GagEyB/config.setCompilers/conftest.c 
> > Successful compile:
> > 
> > 
> > sept-8: ================================================================================
> > TEST checkSharedLinker from config.setCompilers(/usr/home/balay/petsc.clone-2/config/BuildSystem/config/setCompilers.py:1263)
> > TESTING: checkSharedLinker from config.setCompilers(/usr/home/balay/petsc.clone-2/config/BuildSystem/config/setCompilers.py:1263)
> >  Check that the linker can produce shared libraries
> > Executing: uname -s
> > stdout: FreeBSD
> >                              Checking shared linker /usr/home/balay/petsc.clone-2/arch-freebsd-cxx-pkgs-opt/bin/mpicxx using flags ['-shared']
> > Checking for program /usr/home/balay/petsc.clone-2/arch-freebsd-cxx-pkgs-opt/bin/mpicxx...found
> >                                  Defined make macro "LD_SHARED" to "/usr/home/balay/petsc.clone-2/arch-freebsd-cxx-pkgs-opt/bin/mpicxx"
> > Executing: /usr/home/balay/petsc.clone-2/arch-freebsd-cxx-pkgs-opt/bin/mpicc -c -o /tmp/petsc-xTFsod/config.setCompilers/conftest.o -I/tmp/petsc-xTFsod/config.compilers -I/tmp/petsc-xTFsod/config.utilities.closure -I/tmp/petsc-xTFsod/config.headers -I/tmp/petsc-xTFsod/config.utilities.cacheDetails -I/tmp/petsc-xTFsod/config.types -I/tmp/petsc-xTFsod/config.atomics -I/tmp/petsc-xTFsod/config.utilities.getResidentSetSize -I/tmp/petsc-xTFsod/config.libraries -I/tmp/petsc-xTFsod/config.utilities.featureTestMacros -I/tmp/petsc-xTFsod/config.utilities.missing -I/tmp/petsc-xTFsod/config.setCompilers -I/tmp/petsc-xTFsod/config.functions   /tmp/petsc-xTFsod/config.setCompilers/conftest.c 
> > Successful compile:
> > <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
> > 
> > So the -fPIC is missing from the sep-8 compile - triggering this issue?
> > 
> > Satish
> > 
> 
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