[petsc-dev] [petsc-maint] Errors when testing PETSc build on Windows
Hector E Barrios Molano
hectorb at utexas.edu
Thu Jun 18 14:25:55 CDT 2015
Hi Satish and Matt,
I just cloned it again and I'm still having the same problem:
$ ./configure --with-cc='win32fe cl' --with-fc='win32fe ifort'
--prefix=/cygdrive/c/Installed/petsc/ --PETSC_ARCH=windows-intel
--with-parmetis-include=/cygdrive/c/Installed/parmetis/include
--with-parmetis-lib=/cygdrive/c/Installed/parmetis/lib/parmetis.lib
--with-metis-include=/cygdrive/c/Installed/parmetis/include
--with-metis-lib=/cygdrive/c/Installed/parmetis/lib/metis.lib
--with-mpi-include=[/cygdrive/c/Installed/msmpi/Include,/cygdrive/c/Installed/msmpi/Include/x64]
--with-mpi-lib=[/cygdrive/c/Installed/msmpi/Lib/x64/msmpi.lib,/cygdrive/c/Installed/msmpi/Lib/x64/msmpifec.lib]
--with-blas-lapack-lib=[/cygdrive/c/Installed/mkl/lib/intel64/mkl_intel_lp64.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_core.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_sequential.lib]
--with-scalapack-include=/cygdrive/c/Installed/mkl/include
--with-scalapack-lib=[/cygdrive/c/Installed/mkl/lib/intel64/mkl_scalapack_lp64.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_blacs_msmpi_lp64.lib]
===============================================================================
Configuring PETSc to compile on your system
===============================================================================
===============================================================================
*****WARNING:
PETSC_DIR appears to be a Git clone - but git is not found in
PATH********
===============================================================================
===============================================================================
Trying to
download http://ftp.mcs.anl.gov/pub/petsc/externalpackages/sowing-1.1.17-p1.tar.gz
for SOWING
===============================================================================
===============================================================================
Running
configure on SOWING; this may take several minutes
===============================================================================
===============================================================================
Running
make on SOWING; this may take several minutes
===============================================================================
===============================================================================
Running
make install on SOWING; this may take several minutes
===============================================================================
TESTING:
checkSharedLibrary from
config.packages.sowing(config/BuildSystem/config/package.py:625)
*******************************************************************************
UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log
for details):
-------------------------------------------------------------------------------
*******Error generating Fortran stubs: Error running bfort
cd /cygdrive/c/Installed/petsc-dev/petsc/include;
BFORT_CONFIG_PATH=/cygdrive/c/Installed/petsc-dev/petsc/lib/petsc/conf
/cygdrive/c/Installed/petsc-dev/petsc/windows-intel/bin/bfort -dir
/cygdrive/c/Installed/petsc-dev/petsc/include/ftn-auto -mnative -ansi
-nomsgs -noprofile -anyname -mapptr -mpi -mpi2 -ferr -ptrprefix Petsc
-ptr64 PETSC_USE_POINTER_CONVERSION -fcaps PETSC_HAVE_FORTRAN_CAPS
-fuscore PETSC_HAVE_FORTRAN_UNDERSCORE -f90mod_skip_header -f90modfile
f90module.f90 petsc.h petscao.h petscbag.h petscblaslapack.h
petscblaslapack_c.h petscblaslapack_caps.h petscblaslapack_stdcall.h
petscblaslapack_uscore.h petscbt.h petsccharacteristic.h petscctable.h
petsccusp.h petscdm.h petscdmcomposite.h petscdmda.h petscdmdatypes.h
petscdmmoab.h petscdmnetwork.h petscdmpatch.h petscdmplex.h
petscdmredundant.h petscdmshell.h petscdmsliced.h petscdmtypes.h
petscdraw.h petscdrawtypes.h petscds.h petscdstypes.h petscdt.h
petscerror.h petscfe.h petscfetypes.h petscfv.h petscfvtypes.h
petscis.h petscistypes.h petscksp.h petsclog.h petscmat.h
petscmatelemental.h petscmath.h petscmatlab.h petscoptions.h petscpc.h
petscpctypes.h petscpf.h petscsf.h petscsftypes.h petscsnes.h
petscsys.h petsctao.h petsctaolinesearch.h petsctime.h petscts.h
petscvalgrind.h petscvec.h petscversion.h petscviennacl.h
petscviewer.h petscviewerhdf5.h petscviewersaws.h petscviewertypes.h
petscwebclient.h
Testing path as file /cygdrive/c/Installed/petsc-dev/petsc/lib/petsc/conf
Testing file /cygdrive/c/Installed/petsc-dev/petsc/lib/petsc/conf/bfort-base.txt
Testing file /cygdrive/c/Installed/petsc-dev/petsc/include/bfort-base.txt
Testing path as file /cygdrive/c/Installed/petsc-dev/petsc/windows-intel/share
Testing file /cygdrive/c/Installed/petsc-dev/petsc/windows-intel/share/bfort-base.txt
Testing file /cygdrive/c/Installed/petsc-dev/petsc/include/bfort-base.txt
Unable to find bfort-base.txt config file in
/cygdrive/c/Installed/petsc-dev/petsc/windows-intel/share*******
*******************************************************************************
Hector
On Thu, Jun 18, 2015 at 1:46 PM, Satish Balay <balay at mcs.anl.gov> wrote:
> On Thu, 18 Jun 2015, Matthew Knepley wrote:
>
>> On Thu, Jun 18, 2015 at 12:09 PM, Hector E Barrios Molano <
>> hectorb at utexas.edu> wrote:
>>
>> > yes I cloned it from git.
>> >
>>
>> There appears to be a problem with your clone. Can you clone it again?
>
> The following is equivalent to a fresh clone [without needing the extra
> network traffic]
>
> rm -rf arch*
> git clean -f -d -x
>
> Satish
>
>
>>
>> Thanks,
>>
>> Matt
>>
>>
>> > On Thu, Jun 18, 2015 at 12:06 PM, Matthew Knepley <knepley at gmail.com>
>> > wrote:
>> > > On Thu, Jun 18, 2015 at 11:57 AM, Hector E Barrios Molano
>> > > <hectorb at utexas.edu> wrote:
>> > >>
>> > >> Hi Satish,
>> > >>
>> > >> Now I'm getting this error. Why its trying to use "bfort"?
>> > >
>> > >
>> > > When using a clone, it tries to run 'bfort'. Are you trying to use a
>> > clone?
>> > >
>> > > Thanks,
>> > >
>> > > Matt
>> > >
>> > >>
>> > >> Thank you,
>> > >>
>> > >>
>> > >> $ ./configure --with-cc='win32fe cl' --with-fc='win32fe ifort'
>> > >> --prefix=/cygdrive/c/Installed/petsc/ --PETSC_ARCH=windows-intel
>> > >> --with-parmetis-include=/cygdrive/c/Installed/parmetis/include
>> > >> --with-parmetis-lib=/cygdrive/c/Installed/parmetis/lib/parmetis.lib
>> > >> --with-metis-include=/cygdrive/c/Installed/parmetis/include
>> > >> --with-metis-lib=/cygdrive/c/Installed/parmetis/lib/metis.lib
>> > >>
>> > >>
>> > --with-mpi-include=[/cygdrive/c/Installed/msmpi/Include,/cygdrive/c/Installed/msmpi/Include/x64]
>> > >>
>> > >>
>> > --with-mpi-lib=[/cygdrive/c/Installed/msmpi/Lib/x64/msmpi.lib,/cygdrive/c/Installed/msmpi/Lib/x64/msmpifec.lib]
>> > >>
>> > >>
>> > --with-blas-lapack-lib=[/cygdrive/c/Installed/mkl/lib/intel64/mkl_intel_lp64.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_core.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_sequential.lib]
>> > >> --with-scalapack-include=/cygdrive/c/Installed/mkl/include
>> > >>
>> > >>
>> > --with-scalapack-lib=[/cygdrive/c/Installed/mkl/lib/intel64/mkl_scalapack_lp64.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_blacs_msmpi_lp64.lib]
>> > >>
>> > >>
>> > ===============================================================================
>> > >> Configuring PETSc to compile on your system
>> > >>
>> > >>
>> > ===============================================================================
>> > >>
>> > >>
>> > ===============================================================================
>> > >>
>> > >>
>> > >> *****WARNING:
>> > >> PETSC_DIR appears to be a Git clone - but git is not found in
>> > >> PATH********
>> > >>
>> > >>
>> > >>
>> > >>
>> > ===============================================================================
>> > >>
>> > >>
>> > >>
>> > ===============================================================================
>> > >> Running
>> > >> configure on SOWING; this may take several minutes
>> > >>
>> > >>
>> > >>
>> > ===============================================================================
>> > >>
>> > >>
>> > >>
>> > ===============================================================================
>> > >> Running
>> > >> make on SOWING; this may take several minutes
>> > >>
>> > >>
>> > >>
>> > ===============================================================================
>> > >>
>> > >>
>> > >>
>> > ===============================================================================
>> > >> Running
>> > >> make install on SOWING; this may take several minutes
>> > >>
>> > >>
>> > >>
>> > ===============================================================================
>> > >> TESTING:
>> > >> checkSharedLibrary from
>> > >> config.packages.sowing(config/BuildSystem/config/package.py:625)
>> > >>
>> > >>
>> > >>
>> > *******************************************************************************
>> > >> UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log
>> > >> for details):
>> > >>
>> > >>
>> > -------------------------------------------------------------------------------
>> > >> *******Error generating Fortran stubs: Error running bfort
>> > >> cd /cygdrive/c/Installed/petsc-dev/petsc/include;
>> > >> BFORT_CONFIG_PATH=/cygdrive/c/Installed/petsc-dev/petsc/lib/petsc/conf
>> > >> /cygdrive/c/Installed/petsc-dev/petsc/windows-intel/bin/bfort -dir
>> > >> /cygdrive/c/Installed/petsc-dev/petsc/include/ftn-auto -mnative -ansi
>> > >> -nomsgs -noprofile -anyname -mapptr -mpi -mpi2 -ferr -ptrprefix Petsc
>> > >> -ptr64 PETSC_USE_POINTER_CONVERSION -fcaps PETSC_HAVE_FORTRAN_CAPS
>> > >> -fuscore PETSC_HAVE_FORTRAN_UNDERSCORE -f90mod_skip_header -f90modfile
>> > >> f90module.f90 petsc.h petscao.h petscbag.h petscblaslapack.h
>> > >> petscblaslapack_c.h petscblaslapack_caps.h petscblaslapack_stdcall.h
>> > >> petscblaslapack_uscore.h petscbt.h petsccharacteristic.h petscctable.h
>> > >> petsccusp.h petscdm.h petscdmcomposite.h petscdmda.h petscdmdatypes.h
>> > >> petscdmmoab.h petscdmnetwork.h petscdmpatch.h petscdmplex.h
>> > >> petscdmredundant.h petscdmshell.h petscdmsliced.h petscdmtypes.h
>> > >> petscdraw.h petscdrawtypes.h petscds.h petscdstypes.h petscdt.h
>> > >> petscerror.h petscfe.h petscfetypes.h petscfv.h petscfvtypes.h
>> > >> petscis.h petscistypes.h petscksp.h petsclog.h petscmat.h
>> > >> petscmatelemental.h petscmath.h petscmatlab.h petscoptions.h petscpc.h
>> > >> petscpctypes.h petscpf.h petscsf.h petscsftypes.h petscsnes.h
>> > >> petscsys.h petsctao.h petsctaolinesearch.h petsctime.h petscts.h
>> > >> petscvalgrind.h petscvec.h petscversion.h petscviennacl.h
>> > >> petscviewer.h petscviewerhdf5.h petscviewersaws.h petscviewertypes.h
>> > >> petscwebclient.h
>> > >> Testing path as file
>> > /cygdrive/c/Installed/petsc-dev/petsc/lib/petsc/conf
>> > >> Testing file
>> > >> /cygdrive/c/Installed/petsc-dev/petsc/lib/petsc/conf/bfort-base.txt
>> > >> Testing file
>> > /cygdrive/c/Installed/petsc-dev/petsc/include/bfort-base.txt
>> > >> Testing path as file
>> > >> /cygdrive/c/Installed/petsc-dev/petsc/windows-intel/share
>> > >> Testing file
>> > >> /cygdrive/c/Installed/petsc-dev/petsc/windows-intel/share/bfort-base.txt
>> > >> Testing file
>> > /cygdrive/c/Installed/petsc-dev/petsc/include/bfort-base.txt
>> > >> Unable to find bfort-base.txt config file in
>> > >> /cygdrive/c/Installed/petsc-dev/petsc/windows-intel/share*******
>> > >>
>> > >>
>> > *******************************************************************************
>> > >>
>> > >> Hector
>> > >>
>> > >> On Wed, Jun 17, 2015 at 5:16 PM, Satish Balay <balay at mcs.anl.gov>
>> > wrote:
>> > >> > Hm - perhaps you have a different 'find' command in your path. What do
>> > >> > you have for:
>> > >> >
>> > >> > which find
>> > >> >
>> > >> > Try:
>> > >> >
>> > >> > export PATH=/usr/bin:${PATH}
>> > >> >
>> > >> > and rerun configure
>> > >> >
>> > >> > We should look at replacing all shell code with python equivalent..
>> > >> >
>> > >> > Satish
>> > >> >
>> > >> > On Wed, 17 Jun 2015, Hector E Barrios Molano wrote:
>> > >> >
>> > >> >> Hi Satish,
>> > >> >>
>> > >> >> Taking out --with-sowing=0 gives me:
>> > >> >>
>> > >> >> $ ./configure --with-cc='win32fe cl' --with-fc='win32fe ifort'
>> > >> >> --prefix=/cygdrive/c/Installed/petsc/ --PETSC_ARCH=windows-intel
>> > >> >> --with-parmetis-include=/cygdrive/c/Installed/parmetis/include
>> > >> >> --with-parmetis-lib=/cygdrive/c/Installed/parmetis/lib/parmetis.lib
>> > >> >> --with-metis-include=/cygdrive/c/Installed/parmetis/include
>> > >> >> --with-metis-lib=/cygdrive/c/Installed/parmetis/lib/metis.lib
>> > >> >>
>> > >> >>
>> > --with-mpi-include=[/cygdrive/c/Installed/msmpi/Include,/cygdrive/c/Installed/msmpi/Include/x64]
>> > >> >>
>> > >> >>
>> > --with-mpi-lib=[/cygdrive/c/Installed/msmpi/Lib/x64/msmpi.lib,/cygdrive/c/Installed/msmpi/Lib/x64/msmpifec.lib]
>> > >> >>
>> > >> >>
>> > --with-blas-lapack-lib=[/cygdrive/c/Installed/mkl/lib/intel64/mkl_intel_lp64.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_core.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_sequential.lib]
>> > >> >> --with-scalapack-include=/cygdrive/c/Installed/mkl/include
>> > >> >>
>> > >> >>
>> > --with-scalapack-lib=[/cygdrive/c/Installed/mkl/lib/intel64/mkl_scalapack_lp64.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_blacs_msmpi_lp64.lib]
>> > >> >>
>> > >> >>
>> > ===============================================================================
>> > >> >> Configuring PETSc to compile on your system
>> > >> >>
>> > >> >>
>> > ===============================================================================
>> > >> >>
>> > >> >>
>> > ===============================================================================
>> > >> >>
>> > >> >>
>> > >> >> *****WARNING:
>> > >> >> PETSC_DIR appears to be a Git clone - but git is not found in
>> > >> >> PATH********
>> > >> >>
>> > >> >>
>> > >> >>
>> > >> >>
>> > ===============================================================================
>> > >> >>
>> > >> >>
>> > >> >>
>> > ===============================================================================
>> > >> >> Trying to
>> > >> >> download
>> > >> >>
>> > http://ftp.mcs.anl.gov/pub/petsc/externalpackages/sowing-1.1.17-p1.tar.gz
>> > >> >> for SOWING
>> > >> >>
>> > >> >>
>> > ===============================================================================
>> > >> >>
>> > >> >>
>> > >> >>
>> > ===============================================================================
>> > >> >> Trying to
>> > >> >> download
>> > >> >>
>> > ftp://ftp.mcs.anl.gov/pub/petsc/externalpackages/sowing-1.1.17-p1.tar.gz
>> > >> >> for SOWING
>> > >> >>
>> > >> >>
>> > ===============================================================================
>> > >> >>
>> > >> >>
>> > >> >>
>> > >> >>
>> > >> >>
>> > *******************************************************************************
>> > >> >> UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log
>> > >> >> for details):
>> > >> >>
>> > >> >>
>> > -------------------------------------------------------------------------------
>> > >> >> Error changing permissions for sowing-1.1.17-p1 obtained from
>> > >> >>
>> > >> >>
>> > /cygdrive/c/Installed/petsc-dev/petsc/windows-intel/externalpackages/_d_sowing-1.1.17-p1.tar.gz
>> > >> >> : Could not execute "cd
>> > >> >> /cygdrive/c/Installed/petsc-dev/petsc/windows-intel/externalpackages;
>> > >> >> chmod -R a+r sowing-1.1.17-p1;find sowing-1.1.17-p1 -type d -name
>> > "*"
>> > >> >> -exec chmod a+rx {} \;":
>> > >> >> FIND: Parameter format not correct
>> > >> >> Error changing permissions for sowing-1.1.17-p1 obtained from
>> > >> >>
>> > >> >>
>> > /cygdrive/c/Installed/petsc-dev/petsc/windows-intel/externalpackages/_d_sowing-1.1.17-p1.tar.gz
>> > >> >> : Could not execute "cd
>> > >> >> /cygdrive/c/Installed/petsc-dev/petsc/windows-intel/externalpackages;
>> > >> >> chmod -R a+r sowing-1.1.17-p1;find sowing-1.1.17-p1 -type d -name
>> > "*"
>> > >> >> -exec chmod a+rx {} \;":
>> > >> >> FIND: Parameter format not correct
>> > >> >>
>> > >> >>
>> > *******************************************************************************
>> > >> >>
>> > >> >> On Wed, Jun 17, 2015 at 3:36 PM, Satish Balay <balay at mcs.anl.gov>
>> > >> >> wrote:
>> > >> >> >> --with-sowing=0
>> > >> >> >
>> > >> >> > 1. make sure you have cygwin gcc/g++ installed.
>> > >> >> > 2. configure PETSc without the above option [and rebuild the
>> > >> >> > libraries]
>> > >> >> >
>> > >> >> > Satish
>> > >> >> >
>> > >> >> > On Wed, 17 Jun 2015, Hector E Barrios Molano wrote:
>> > >> >> >
>> > >> >> >> Hi Satish,
>> > >> >> >>
>> > >> >> >> Thank you! It solved some errors. However, I'm still having
>> > problems
>> > >> >> >> with the Fortran test.
>> > >> >> >>
>> > >> >> >> $ make PETSC_DIR=/cygdrive/c/Installed/petsc-dev/petsc
>> > >> >> >> PETSC_ARCH=windows-intel test
>> > >> >> >> Running test examples to verify correct installation
>> > >> >> >> Using PETSC_DIR=/cygdrive/c/Installed/petsc-dev/petsc and
>> > >> >> >> PETSC_ARCH=windows-intel
>> > >> >> >> C/C++ example src/snes/examples/tutorials/ex19 run successfully
>> > with
>> > >> >> >> 1
>> > >> >> >> MPI process
>> > >> >> >> C/C++ example src/snes/examples/tutorials/ex19 run successfully
>> > with
>> > >> >> >> 2
>> > >> >> >> MPI processes
>> > >> >> >> *******************Error detected during compile or
>> > >> >> >> link!*******************
>> > >> >> >> See http://www.mcs.anl.gov/petsc/documentation/faq.html
>> > >> >> >> /cygdrive/c/Installed/petsc-dev/petsc/src/snes/examples/tutorials
>> > >> >> >> ex5f
>> > >> >> >> *********************************************************
>> > >> >> >> /cygdrive/c/Installed/petsc-dev/petsc/bin/win32fe/win32fe ifort -c
>> > >> >> >> -MT -Z7 -fpp -I/cygdrive/c/Installed/petsc-dev/petsc/include
>> > >> >> >> -I/cygdrive/c/Installed/petsc-dev/petsc/windows-intel/include
>> > >> >> >> -I/cygdrive/c/Installed/parmetis/include
>> > >> >> >> -I/cygdrive/c/Installed/msmpi/Include
>> > >> >> >> -I/cygdrive/c/Installed/msmpi/Include/x64 -o ex5f.o ex5f.F
>> > >> >> >> /cygdrive/c/Installed/petsc-dev/petsc/bin/win32fe/win32fe ifort
>> > -MT
>> > >> >> >> -Z7 -fpp -o ex5f ex5f.o
>> > >> >> >> -L/cygdrive/c/Installed/petsc-dev/petsc/windows-intel/lib -lpetsc
>> > >> >> >> /cygdrive/c/Installed/mkl/lib/intel64/mkl_scalapack_lp64.lib
>> > >> >> >> /cygdrive/c/Installed/mkl/lib/intel64/mkl_blacs_msmpi_lp64.lib
>> > >> >> >> /cygdrive/c/Installed/mkl/lib/intel64/mkl_intel_lp64.lib
>> > >> >> >> /cygdrive/c/Installed/mkl/lib/intel64/mkl_core.lib
>> > >> >> >> /cygdrive/c/Installed/mkl/lib/intel64/mkl_sequential.lib
>> > >> >> >> /cygdrive/c/Installed/parmetis/lib/parmetis.lib
>> > >> >> >> /cygdrive/c/Installed/parmetis/lib/metis.lib
>> > >> >> >> /cygdrive/c/Installed/msmpi/Lib/x64/msmpi.lib
>> > >> >> >> /cygdrive/c/Installed/msmpi/Lib/x64/msmpifec.lib Gdi32.lib
>> > >> >> >> User32.lib
>> > >> >> >> Advapi32.lib Kernel32.lib Ws2_32.lib
>> > >> >> >> ex5f.obj : error LNK2019: unresolved external symbol SNESCREATE
>> > >> >> >> referenced in function MAIN__
>> > >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > >> >> >> DMCREATEGLOBALVECTOR referenced in function MAIN__
>> > >> >> >> ex5f.obj : error LNK2019: unresolved external symbol VECDUPLICATE
>> > >> >> >> referenced in function MAIN__
>> > >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > DMDAGETCORNERS
>> > >> >> >> referenced in function MAIN__
>> > >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > >> >> >> DMDAGETGHOSTCORNERS referenced in function MAIN__
>> > >> >> >> ex5f.obj : error LNK2019: unresolved external symbol SNESSETDM
>> > >> >> >> referenced in function MAIN__
>> > >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > >> >> >> SNESSETFROMOPTIONS referenced in function MAIN__
>> > >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > >> >> >> SNESGETITERATIONNUMBER referenced in function MAIN__
>> > >> >> >> ex5f.obj : error LNK2019: unresolved external symbol VECDESTROY
>> > >> >> >> referenced in function MAIN__
>> > >> >> >> ex5f.obj : error LNK2019: unresolved external symbol SNESDESTROY
>> > >> >> >> referenced in function MAIN__
>> > >> >> >> ex5f.obj : error LNK2019: unresolved external symbol DMDESTROY
>> > >> >> >> referenced in function MAIN__
>> > >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > >> >> >> MATSETVALUESLOCAL
>> > >> >> >> referenced in function FORMJACOBIANLOCAL
>> > >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > >> >> >> MATASSEMBLYBEGIN
>> > >> >> >> referenced in function FORMJACOBIANLOCAL
>> > >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > MATASSEMBLYEND
>> > >> >> >> referenced in function FORMJACOBIANLOCAL
>> > >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\snes\examples\TUTORI~1\ex5f.exe :
>> > >> >> >> fatal
>> > >> >> >> error LNK1120: 14 unresolved externals
>> > >> >> >> makefile:50: recipe for target 'ex5f' failed
>> > >> >> >> make[3]: [ex5f] Error 96 (ignored)
>> > >> >> >> /usr/bin/rm -f ex5f.o
>> > >> >> >> Completed test examples
>> > >> >> >> =========================================
>> > >> >> >> Now to evaluate the computer systems you plan use - do:
>> > >> >> >> make PETSC_DIR=/cygdrive/c/Installed/petsc-dev/petsc
>> > >> >> >> PETSC_ARCH=windows-intel streams NPMAX=<number of MPI processes
>> > you
>> > >> >> >> intend to use>
>> > >> >> >>
>> > >> >> >> On Wed, Jun 17, 2015 at 3:01 PM, Satish Balay <balay at mcs.anl.gov>
>> > >> >> >> wrote:
>> > >> >> >> > /cygdrive/c/Installed/mkl/lib/intel64/mkl_intel_ilp64.lib
>> > >> >> >> >
>> > >> >> >> > This is the wrong version of MKL. You should look for lp64
>> > variant
>> > >> >> >> > [not ilp64]
>> > >> >> >> >
>> > >> >> >> > [you can just edit
>> > >> >> >> > PETSC_DIR/PETSC_ARCH/lib/petsc/conf/petscvariables and make this
>> > >> >> >> > change manually - and retry compiling the example]
>> > >> >> >> >
>> > >> >> >> > Satish
>> > >> >> >> >
>> > >> >> >> > On Wed, 17 Jun 2015, Hector E Barrios Molano wrote:
>> > >> >> >> >
>> > >> >> >> >> Hi PETSc Experts!
>> > >> >> >> >>
>> > >> >> >> >> I'm trying to build PETSc on a Windows machine, I got errors
>> > >> >> >> >> during
>> > >> >> >> >> the test part. I downloaded petsc-dev from git.
>> > >> >> >> >>
>> > >> >> >> >>
>> > >> >> >> >> This are my configuration command:
>> > >> >> >> >>
>> > >> >> >> >> $ ./configure --with-cc='win32fe cl' --with-fc='win32fe ifort'
>> > >> >> >> >> --prefix=/cygdrive/c/Installed/petsc/
>> > --PETSC_ARCH=windows-intel
>> > >> >> >> >> --with-parmetis-include=/cygdrive/c/Installed/parmetis/include
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-parmetis-lib=/cygdrive/c/Installed/parmetis/lib/parmetis.lib
>> > >> >> >> >> --with-metis-include=/cygdrive/c/Installed/parmetis/include
>> > >> >> >> >> --with-metis-lib=/cygdrive/c/Installed/parmetis/lib/metis.lib
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-mpi-include=[/cygdrive/c/Installed/msmpi/Include,/cygdrive/c/Installed/msmpi/Include/x64]
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-mpi-lib=[/cygdrive/c/Installed/msmpi/Lib/x64/msmpi.lib,/cygdrive/c/Installed/msmpi/Lib/x64/msmpifec.lib]
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-blas-lapack-lib=[/cygdrive/c/Installed/mkl/lib/intel64/mkl_intel_ilp64.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_core.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_sequential.lib]
>> > >> >> >> >> --with-scalapack-include=/cygdrive/c/Installed/mkl/include
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-scalapack-lib=[/cygdrive/c/Installed/mkl/lib/intel64/mkl_scalapack_ilp64.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_blacs_msmpi_ilp64.lib]
>> > >> >> >> >> --with-sowing=0
>> > >> >> >> >>
>> > >> >> >> >>
>> > >> >> >> >> I was able con configure and compile:
>> > >> >> >> >>
>> > >> >> >> >> make PETSC_DIR=/cygdrive/c/Installed/petsc-dev/petsc
>> > >> >> >> >> PETSC_ARCH=windows-intel all
>> > >> >> >> >>
>> > >> >> >> >> However, when testing I got these errors:
>> > >> >> >> >>
>> > >> >> >> >> $ make PETSC_DIR=/cygdrive/c/Installed/petsc-dev/petsc
>> > >> >> >> >> PETSC_ARCH=windows-intel test
>> > >> >> >> >> Running test examples to verify correct installation
>> > >> >> >> >> Using PETSC_DIR=/cygdrive/c/Installed/petsc-dev/petsc and
>> > >> >> >> >> PETSC_ARCH=windows-intel
>> > >> >> >> >> Possible error running C/C++ src/snes/examples/tutorials/ex19
>> > >> >> >> >> with 1 MPI process
>> > >> >> >> >> See http://www.mcs.anl.gov/petsc/documentation/faq.html
>> > >> >> >> >> lid velocity = 0.0016, prandtl # = 1, grashof # = 1
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >>
>> > >> >> >> >>
>> > ------------------------------------------------------------------------
>> > >> >> >> >> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation
>> > >> >> >> >> Violation,
>> > >> >> >> >> probably memory access out of range
>> > >> >> >> >> [0]PETSC ERROR: Try option -start_in_debugger or
>> > >> >> >> >> -on_error_attach_debugger
>> > >> >> >> >> [0]PETSC ERROR: or see
>> > >> >> >> >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind
>> > >> >> >> >> [0]PETSC ERROR: or try http://valgrind.org on GNU/linux and
>> > Apple
>> > >> >> >> >> Mac
>> > >> >> >> >> OS X to find memory corruption errors
>> > >> >> >> >> [0]PETSC ERROR: likely location of problem given in stack below
>> > >> >> >> >> [0]PETSC ERROR: --------------------- Stack Frames
>> > >> >> >> >> ------------------------------------
>> > >> >> >> >> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are
>> > not
>> > >> >> >> >> available,
>> > >> >> >> >> [0]PETSC ERROR: INSTEAD the line number of the start of
>> > the
>> > >> >> >> >> function
>> > >> >> >> >> [0]PETSC ERROR: is given.
>> > >> >> >> >> [0]PETSC ERROR: [0] VecNorm_Seq line 240
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\vec\vec\impls\seq\bvec2.c
>> > >> >> >> >> [0]PETSC ERROR: [0] VecNorm line 228
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\vec\vec\INTERF~1\rvector.c
>> > >> >> >> >> [0]PETSC ERROR: [0] SNESSolve_NEWTONLS line 150
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\snes\impls\ls\ls.c
>> > >> >> >> >> [0]PETSC ERROR: [0] SNESSolve line 3847
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\snes\INTERF~1\snes.c
>> > >> >> >> >> [0]PETSC ERROR: [0] main line 108
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\snes\examples\TUTORI~1\ex19.c
>> > >> >> >> >> [0]PETSC ERROR: --------------------- Error Message
>> > >> >> >> >> --------------------------------------------------------------
>> > >> >> >> >> [0]PETSC ERROR: Signal received
>> > >> >> >> >> [0]PETSC ERROR: See
>> > >> >> >> >> http://www.mcs.anl.gov/petsc/documentation/faq.html for
>> > trouble
>> > >> >> >> >> shooting.
>> > >> >> >> >> [0]PETSC ERROR: Petsc Development GIT revision: unknown GIT
>> > >> >> >> >> Date: unknown
>> > >> >> >> >> [0]PETSC ERROR: ./ex19 on a windows-intel named HECTOR-PC by
>> > >> >> >> >> hector
>> > >> >> >> >> Wed Jun 17 14:21:38 2015
>> > >> >> >> >> [0]PETSC ERROR: Configure options --with-cc="win32fe cl"
>> > >> >> >> >> --with-fc="win32fe ifort" --prefix=/cygdrive/c/Installed/petsc/
>> > >> >> >> >> --PETSC_ARCH=windows-intel
>> > >> >> >> >> --with-parmetis-include=/cygdrive/c/Installed/parmetis/include
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-parmetis-lib=/cygdrive/c/Installed/parmetis/lib/parmetis.lib
>> > >> >> >> >> --with-metis-include=/cygdrive/c/Installed/parmetis/include
>> > >> >> >> >> --with-metis-lib=/cygdrive/c/Installed/parmetis/lib/metis.lib
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-mpi-include="[/cygdrive/c/Installed/msmpi/Include,/cygdrive/c/Installed/msmpi/Include/x64]"
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-mpi-lib="[/cygdrive/c/Installed/msmpi/Lib/x64/msmpi.lib,/cygdrive/c/Installed/msmpi/Lib/x64/msmpifec.lib]"
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-blas-lapack-lib="[/cygdrive/c/Installed/mkl/lib/intel64/mkl_intel_ilp64.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_core.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_sequential.lib]"
>> > >> >> >> >> --with-scalapack-include=/cygdrive/c/Installed/mkl/include
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-scalapack-lib="[/cygdrive/c/Installed/mkl/lib/intel64/mkl_scalapack_ilp64.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_blacs_msmpi_ilp64.lib]"
>> > >> >> >> >> --with-sowing=0
>> > >> >> >> >> [0]PETSC ERROR: #1 User provided function() line 0 in unknown
>> > >> >> >> >> file
>> > >> >> >> >>
>> > >> >> >> >> job aborted:
>> > >> >> >> >> [ranks] message
>> > >> >> >> >>
>> > >> >> >> >> [0] application aborted
>> > >> >> >> >> aborting MPI_COMM_WORLD (comm=0x44000000), error 59, comm rank
>> > 0
>> > >> >> >> >>
>> > >> >> >> >> ---- error analysis -----
>> > >> >> >> >>
>> > >> >> >> >> [0] on hector-PC
>> > >> >> >> >> ./ex19 aborted the job. abort code 59
>> > >> >> >> >>
>> > >> >> >> >> ---- error analysis -----
>> > >> >> >> >> Possible error running C/C++ src/snes/examples/tutorials/ex19
>> > >> >> >> >> with 2
>> > >> >> >> >> MPI processes
>> > >> >> >> >> See http://www.mcs.anl.gov/petsc/documentation/faq.html
>> > >> >> >> >> lid velocity = 0.0016, prandtl # = 1, grashof # = 1
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >>
>> > >> >> >> >>
>> > ------------------------------------------------------------------------
>> > >> >> >> >>
>> > >> >> >> >>
>> > ------------------------------------------------------------------------
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> Caught signal number 11 SEGV: Segmentation Violation, probably
>> > >> >> >> >> memory
>> > >> >> >> >> access out of range
>> > >> >> >> >> Caught signal number 11 SEGV: Segmentation Violation, probably
>> > >> >> >> >> memory
>> > >> >> >> >> access out of range
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> Try option -start_in_debugger or -on_error_attach_debugger
>> > >> >> >> >> Try option -start_in_debugger or -on_error_attach_debugger
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> or see
>> > >> >> >> >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind
>> > >> >> >> >> or see
>> > >> >> >> >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> or try http://valgrind.org on GNU/linux and Apple Mac OS X to
>> > >> >> >> >> find
>> > >> >> >> >> memory corruption errors
>> > >> >> >> >> or try http://valgrind.org on GNU/linux and Apple Mac OS X to
>> > >> >> >> >> find
>> > >> >> >> >> memory corruption errors
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> likely location of problem given in stack below
>> > >> >> >> >> likely location of problem given in stack below
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> --------------------- Stack Frames
>> > >> >> >> >> ------------------------------------
>> > >> >> >> >> --------------------- Stack Frames
>> > >> >> >> >> ------------------------------------
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> Note: The EXACT line numbers in the stack are not available,
>> > >> >> >> >> Note: The EXACT line numbers in the stack are not available,
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> INSTEAD the line number of the start of the function
>> > >> >> >> >> INSTEAD the line number of the start of the function
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> is given.
>> > >> >> >> >> is given.
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> [0] VecNorm_MPI line 57
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\vec\vec\impls\mpi\pvec2.c
>> > >> >> >> >> [1] VecNorm_MPI line 57
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\vec\vec\impls\mpi\pvec2.c
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> [0] VecNorm line 228
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\vec\vec\INTERF~1\rvector.c
>> > >> >> >> >> [1] VecNorm line 228
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\vec\vec\INTERF~1\rvector.c
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> [0] SNESSolve_NEWTONLS line 150
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\snes\impls\ls\ls.c
>> > >> >> >> >> [1] SNESSolve_NEWTONLS line 150
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\snes\impls\ls\ls.c
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> [0] SNESSolve line 3847
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\snes\INTERF~1\snes.c
>> > >> >> >> >> [1] SNESSolve line 3847
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\snes\INTERF~1\snes.c
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> [0] main line 108
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\snes\examples\TUTORI~1\ex19.c
>> > >> >> >> >> [1] main line 108
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\snes\examples\TUTORI~1\ex19.c
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> --------------------- Error Message
>> > >> >> >> >> --------------------------------------------------------------
>> > >> >> >> >> --------------------- Error Message
>> > >> >> >> >> --------------------------------------------------------------
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> Signal received
>> > >> >> >> >> Signal received
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> See http://www.mcs.anl.gov/petsc/documentation/faq.html for
>> > >> >> >> >> trouble shooting.
>> > >> >> >> >> See http://www.mcs.anl.gov/petsc/documentation/faq.html for
>> > >> >> >> >> trouble shooting.
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> Petsc Development GIT revision: unknown GIT Date: unknown
>> > >> >> >> >> Petsc Development GIT revision: unknown GIT Date: unknown
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> ./ex19 on a windows-intel named HECTOR-PC by hector Wed Jun 17
>> > >> >> >> >> 14:21:38 2015
>> > >> >> >> >> ./ex19 on a windows-intel named HECTOR-PC by hector Wed Jun 17
>> > >> >> >> >> 14:21:38 2015
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> Configure options --with-cc="win32fe cl" --with-fc="win32fe
>> > >> >> >> >> ifort"
>> > >> >> >> >> --prefix=/cygdrive/c/Installed/petsc/
>> > --PETSC_ARCH=windows-intel
>> > >> >> >> >> --with-parmetis-include=/cygdrive/c/Installed/parmetis/include
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-parmetis-lib=/cygdrive/c/Installed/parmetis/lib/parmetis.lib
>> > >> >> >> >> --with-metis-include=/cygdrive/c/Installed/parmetis/include
>> > >> >> >> >> --with-metis-lib=/cygdrive/c/Installed/parmetis/lib/metis.lib
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-mpi-include="[/cygdrive/c/Installed/msmpi/Include,/cygdrive/c/Installed/msmpi/Include/x64]"
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-mpi-lib="[/cygdrive/c/Installed/msmpi/Lib/x64/msmpi.lib,/cygdrive/c/Installed/msmpi/Lib/x64/msmpifec.lib]"
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-blas-lapack-lib="[/cygdrive/c/Installed/mkl/lib/intel64/mkl_intel_ilp64.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_core.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_sequential.lib]"
>> > >> >> >> >> --with-scalapack-include=/cygdrive/c/Installed/mkl/include
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-scalapack-lib="[/cygdrive/c/Installed/mkl/lib/intel64/mkl_scalapack_ilp64.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_blacs_msmpi_ilp64.lib]"
>> > >> >> >> >> --with-sowing=0
>> > >> >> >> >> Configure options --with-cc="win32fe cl" --with-fc="win32fe
>> > >> >> >> >> ifort"
>> > >> >> >> >> --prefix=/cygdrive/c/Installed/petsc/
>> > --PETSC_ARCH=windows-intel
>> > >> >> >> >> --with-parmetis-include=/cygdrive/c/Installed/parmetis/include
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-parmetis-lib=/cygdrive/c/Installed/parmetis/lib/parmetis.lib
>> > >> >> >> >> --with-metis-include=/cygdrive/c/Installed/parmetis/include
>> > >> >> >> >> --with-metis-lib=/cygdrive/c/Installed/parmetis/lib/metis.lib
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-mpi-include="[/cygdrive/c/Installed/msmpi/Include,/cygdrive/c/Installed/msmpi/Include/x64]"
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-mpi-lib="[/cygdrive/c/Installed/msmpi/Lib/x64/msmpi.lib,/cygdrive/c/Installed/msmpi/Lib/x64/msmpifec.lib]"
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-blas-lapack-lib="[/cygdrive/c/Installed/mkl/lib/intel64/mkl_intel_ilp64.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_core.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_sequential.lib]"
>> > >> >> >> >> --with-scalapack-include=/cygdrive/c/Installed/mkl/include
>> > >> >> >> >>
>> > >> >> >> >>
>> > --with-scalapack-lib="[/cygdrive/c/Installed/mkl/lib/intel64/mkl_scalapack_ilp64.lib,/cygdrive/c/Installed/mkl/lib/intel64/mkl_blacs_msmpi_ilp64.lib]"
>> > >> >> >> >> --with-sowing=0
>> > >> >> >> >> [0]PETSC ERROR:
>> > >> >> >> >> [1]PETSC ERROR:
>> > >> >> >> >> #1 User provided function() line 0 in unknown file
>> > >> >> >> >> #1 User provided function() line 0 in unknown file
>> > >> >> >> >>
>> > >> >> >> >> job aborted:
>> > >> >> >> >> [ranks] message
>> > >> >> >> >>
>> > >> >> >> >> [0] application aborted
>> > >> >> >> >> aborting MPI_COMM_WORLD (comm=0x44000000), error 59, comm rank
>> > 0
>> > >> >> >> >>
>> > >> >> >> >> [1] application aborted
>> > >> >> >> >> aborting MPI_COMM_WORLD (comm=0x44000000), error 59, comm rank
>> > 1
>> > >> >> >> >>
>> > >> >> >> >> ---- error analysis -----
>> > >> >> >> >>
>> > >> >> >> >> [0-1] on hector-PC
>> > >> >> >> >> ./ex19 aborted the job. abort code 59
>> > >> >> >> >>
>> > >> >> >> >> ---- error analysis -----
>> > >> >> >> >> *******************Error detected during compile or
>> > >> >> >> >> link!*******************
>> > >> >> >> >> See http://www.mcs.anl.gov/petsc/documentation/faq.html
>> > >> >> >> >>
>> > /cygdrive/c/Installed/petsc-dev/petsc/src/snes/examples/tutorials
>> > >> >> >> >> ex5f
>> > >> >> >> >> *********************************************************
>> > >> >> >> >> /cygdrive/c/Installed/petsc-dev/petsc/bin/win32fe/win32fe ifort
>> > >> >> >> >> -c
>> > >> >> >> >> -MT -Z7 -fpp -I/cygdrive/c/Installed/petsc-dev/petsc/include
>> > >> >> >> >> -I/cygdrive/c/Installed/petsc-dev/petsc/windows-intel/include
>> > >> >> >> >> -I/cygdrive/c/Installed/parmetis/include
>> > >> >> >> >> -I/cygdrive/c/Installed/msmpi/Include
>> > >> >> >> >> -I/cygdrive/c/Installed/msmpi/Include/x64 -o ex5f.o ex5f.F
>> > >> >> >> >> /cygdrive/c/Installed/petsc-dev/petsc/bin/win32fe/win32fe ifort
>> > >> >> >> >> -MT
>> > >> >> >> >> -Z7 -fpp -o ex5f ex5f.o
>> > >> >> >> >> -L/cygdrive/c/Installed/petsc-dev/petsc/windows-intel/lib
>> > >> >> >> >> -lpetsc
>> > >> >> >> >> /cygdrive/c/Installed/mkl/lib/intel64/mkl_scalapack_ilp64.lib
>> > >> >> >> >> /cygdrive/c/Installed/mkl/lib/intel64/mkl_blacs_msmpi_ilp64.lib
>> > >> >> >> >> /cygdrive/c/Installed/mkl/lib/intel64/mkl_intel_ilp64.lib
>> > >> >> >> >> /cygdrive/c/Installed/mkl/lib/intel64/mkl_core.lib
>> > >> >> >> >> /cygdrive/c/Installed/mkl/lib/intel64/mkl_sequential.lib
>> > >> >> >> >> /cygdrive/c/Installed/parmetis/lib/parmetis.lib
>> > >> >> >> >> /cygdrive/c/Installed/parmetis/lib/metis.lib
>> > >> >> >> >> /cygdrive/c/Installed/msmpi/Lib/x64/msmpi.lib
>> > >> >> >> >> /cygdrive/c/Installed/msmpi/Lib/x64/msmpifec.lib Gdi32.lib
>> > >> >> >> >> User32.lib
>> > >> >> >> >> Advapi32.lib Kernel32.lib Ws2_32.lib
>> > >> >> >> >> ex5f.obj : error LNK2019: unresolved external symbol SNESCREATE
>> > >> >> >> >> referenced in function MAIN__
>> > >> >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > >> >> >> >> DMCREATEGLOBALVECTOR referenced in function MAIN__
>> > >> >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > VECDUPLICATE
>> > >> >> >> >> referenced in function MAIN__
>> > >> >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > >> >> >> >> DMDAGETCORNERS
>> > >> >> >> >> referenced in function MAIN__
>> > >> >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > >> >> >> >> DMDAGETGHOSTCORNERS referenced in function MAIN__
>> > >> >> >> >> ex5f.obj : error LNK2019: unresolved external symbol SNESSETDM
>> > >> >> >> >> referenced in function MAIN__
>> > >> >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > >> >> >> >> SNESSETFROMOPTIONS referenced in function MAIN__
>> > >> >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > >> >> >> >> SNESGETITERATIONNUMBER referenced in function MAIN__
>> > >> >> >> >> ex5f.obj : error LNK2019: unresolved external symbol VECDESTROY
>> > >> >> >> >> referenced in function MAIN__
>> > >> >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > SNESDESTROY
>> > >> >> >> >> referenced in function MAIN__
>> > >> >> >> >> ex5f.obj : error LNK2019: unresolved external symbol DMDESTROY
>> > >> >> >> >> referenced in function MAIN__
>> > >> >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > >> >> >> >> MATSETVALUESLOCAL
>> > >> >> >> >> referenced in function FORMJACOBIANLOCAL
>> > >> >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > >> >> >> >> MATASSEMBLYBEGIN
>> > >> >> >> >> referenced in function FORMJACOBIANLOCAL
>> > >> >> >> >> ex5f.obj : error LNK2019: unresolved external symbol
>> > >> >> >> >> MATASSEMBLYEND
>> > >> >> >> >> referenced in function FORMJACOBIANLOCAL
>> > >> >> >> >> C:\INSTAL~1\PETSC-~1\petsc\src\snes\examples\TUTORI~1\ex5f.exe
>> > :
>> > >> >> >> >> fatal
>> > >> >> >> >> error LNK1120: 14 unresolved externals
>> > >> >> >> >> makefile:50: recipe for target 'ex5f' failed
>> > >> >> >> >> make[3]: [ex5f] Error 96 (ignored)
>> > >> >> >> >> /usr/bin/rm -f ex5f.o
>> > >> >> >> >> Completed test examples
>> > >> >> >> >> =========================================
>> > >> >> >> >> Now to evaluate the computer systems you plan use - do:
>> > >> >> >> >> make PETSC_DIR=/cygdrive/c/Installed/petsc-dev/petsc
>> > >> >> >> >> PETSC_ARCH=windows-intel streams NPMAX=<number of MPI processes
>> > >> >> >> >> you
>> > >> >> >> >> intend to use>
>> > >> >> >> >>
>> > >> >> >> >>
>> > >> >> >> >> Best Regards,
>> > >> >> >> >>
>> > >> >> >> >> Hector
>> > >> >> >> >>
>> > >> >> >> >
>> > >> >> >>
>> > >> >> >
>> > >> >>
>> > >> >
>> > >
>> > >
>> > >
>> > >
>> > > --
>> > > What most experimenters take for granted before they begin their
>> > experiments
>> > > is infinitely more interesting than any results to which their
>> > experiments
>> > > lead.
>> > > -- Norbert Wiener
>> >
>>
>>
>>
>>
>
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