[petsc-dev] Error while building MAGMA from PETSc

[Harshad Sahasrabudhe]

Yes, -DHAVE_CUBLAS is defined while compilation, but somehow I'm getting this error.

----- Original Message -----
From: "Karl Rupp" <rupp at mcs.anl.gov>
To: "Harshad Sahasrabudhe" <hsahasra at purdue.edu>
Cc: "Barry Smith" <bsmith at mcs.anl.gov>, "For users of the development version of PETSc" <petsc-dev at mcs.anl.gov>
Sent: Thursday, August 15, 2013 4:18:57 PM
Subject: Re: [petsc-dev] Error while building MAGMA from PETSc

Hey,

apparently there must be one out of {CUBLAS, clAmdBlas, ICC for MIC} 
installed. CUBLAS is already made available via --with-cuda, so you 
should be fine pointing Magma to the CUDA folder. We don't have package 
checks for clAmdBlas or MIC.

Best regards,
Karli


On 08/15/2013 03:13 PM, Harshad Sahasrabudhe wrote:
> How does the testing work? What headers and functions do I need to include in magma.py?
>
> ----- Original Message -----
> From: "Barry Smith" <bsmith at mcs.anl.gov>
> To: "Harshad Sahasrabudhe" <hsahasra at purdue.edu>
> Cc: "Jed Brown" <jedbrown at mcs.anl.gov>, "For users of the development version of PETSc" <petsc-dev at mcs.anl.gov>
> Sent: Thursday, August 15, 2013 4:01:29 PM
> Subject: Re: [petsc-dev] Error while building MAGMA from PETSc
>
>
> Possible ERROR while running preprocessor: In file included from /home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magmablas_z.h:14:0,
>                   from /home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magmablas.h:12,
>                   from /home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magma.h:15,
>                   from /tmp/petsc-Z_wD6e/config.headers/conftest.c:3:
> /home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magma_types.h:146:6: error: #error "One of HAVE_CUBLAS, HAVE_clAmdBlas, or HAVE_MIC must be defined. This typically happens in Makefile.internal."
> ret = 256
> error message = {In file included from /home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magmablas_z.h:14:0,
>                   from /home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magmablas.h:12,
>                   from /home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magma.h:15,
>                   from /tmp/petsc-Z_wD6e/config.headers/conftest.c:3:
> /home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magma_types.h:146:6: error: #error "One of HAVE_CUBLAS, HAVE_clAmdBlas, or HAVE_MIC must be defined. This typically happens in Makefile.internal."
>
>
> On Aug 15, 2013, at 2:43 PM, Harshad Sahasrabudhe <hsahasra at purdue.edu> wrote:
>
>> Attached is the diff and configure.log
>>
>> ----- Original Message -----
>> From: "Jed Brown" <jedbrown at mcs.anl.gov>
>> To: "Matthew Knepley" <knepley at gmail.com>
>> Cc: "Harshad Sahasrabudhe" <hsahasra at purdue.edu>, "For users of the development version of PETSc" <petsc-dev at mcs.anl.gov>
>> Sent: Thursday, August 15, 2013 3:33:33 PM
>> Subject: Re: [petsc-dev] Error while building MAGMA from PETSc
>>
>>
>>
>> ... and send the changes you have made. One way to do that is to 'git add config/PETSc/packages/magma.py' and send the output if 'git diff master'.
>> On Aug 15, 2013 2:28 PM, "Matthew Knepley" < knepley at gmail.com > wrote:
>>
>>
>>
>> On Thu, Aug 15, 2013 at 1:56 PM, Harshad Sahasrabudhe < hsahasra at purdue.edu > wrote:
>>
>>
>>
>>
>> Hi,
>>
>> Now MAGMA compiles correctly and libmagma.a is generated, however PETSc says
>>
>> Downloaded magma could not be used. Please check install in /home/harshad/workspace/petsc-hg/arch-linux2-c-debug
>>
>> I am copying the generated library and include files to the install directory using
>>
>> includeDir = os.path.join(self.installDir, self.includedir)
>> output,err,ret = PETSc.package.NewPackage.executeShellCommand('cd '+self.packageDir+' && mv -f lib/*.* '+libDir+'/. && cp -f include/*.* '+includeDir+'/.', timeout=2500, log = self.framework.log)
>>
>> I need help in resolving this error.
>>
>>
>>
>> Always send configure.log.
>>
>>
>> Matt
>>
>>
>> Thanks,
>> Harshad
>>
>> ----- Original Message -----
>> From: "Matthew Knepley" < knepley at gmail.com >
>> To: "Harshad Sahasrabudhe" < hsahasra at purdue.edu >
>> Cc: "For users of the development version of PETSc" < petsc-dev at mcs.anl.gov >
>> Sent: Wednesday, August 14, 2013 6:27:04 PM
>> Subject: Re: [petsc-dev] Error while building MAGMA from PETSc
>>
>>
>> On Wed, Aug 14, 2013 at 5:23 PM, Harshad Sahasrabudhe < hsahasra at purdue.edu > wrote:
>>
>>
>>
>>
>>
>>
>> Hi,
>>
>> I'm trying the write the package compiler for MAGMA using PETSc build system. I'm getting the following error while building MAGMA. With the error, I'm also getting a couple hundred warnings:
>>
>> sormqr_gpu_2stage.cpp: In function ‘magma_int_t magma_sormqr_gpu_2stages(char, char, magma_int_t, magma_int_t, magma_int_t, float*, magma_int_t, float*, magma_int_t, float*, magma_int_t, magma_int_t*)’:
>> sormqr_gpu_2stage.cpp:98: warning: unused variable ‘c_one’
>> sormqr_gpu_2stage.cpp:107: warning: unused variable ‘lwkopt’
>> strsm_m.cpp: In function ‘magma_int_t magma_strsm_m(magma_int_t, char, char, char, char, magma_int_t, magma_int_t, float, float*, magma_int_t, float*, magma_int_t)’:
>> strsm_m.cpp:181: warning: unused variable ‘jj’
>> strsm_m.cpp:181: warning: unused variable ‘jjb’
>> sgeev.cpp: In function ‘magma_int_t magma_sgeev(char, char, magma_int_t, float*, magma_int_t, float*, float*, float*, magma_int_t, float*, magma_int_t, float*, magma_int_t, magma_int_t*)’:
>> sgeev.cpp:126: warning: unused variable ‘c_n1’
>> nvcc fatal : redefinition of argument 'gpu-architecture'
>>
>>
>> What is the easiest way to debug this kind of an error?
>>
>>
>>
>> 1) Make the MAGMA build system print out the full compile line
>>
>>
>> 2) Make the MAGMA people clean up their sloppy code, which would eliminate the warnings
>>
>>
>> Matt
>>
>>
>>
>>
>> Thanks,
>> Harshad
>>
>>
>>
>>
>>
>> --
>> What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.
>> -- Norbert Wiener
>>
>>
>>
>>
>> --
>> What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.
>> -- Norbert Wiener<diff_magma><configure.log>
>