[petsc-dev] Error while building MAGMA from PETSc

[Barry Smith]

Possible ERROR while running preprocessor: In file included from /home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magmablas_z.h:14:0,
                 from /home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magmablas.h:12,
                 from /home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magma.h:15,
                 from /tmp/petsc-Z_wD6e/config.headers/conftest.c:3:
/home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magma_types.h:146:6: error: #error "One of HAVE_CUBLAS, HAVE_clAmdBlas, or HAVE_MIC must be defined. This typically happens in Makefile.internal."
ret = 256
error message = {In file included from /home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magmablas_z.h:14:0,
                 from /home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magmablas.h:12,
                 from /home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magma.h:15,
                 from /tmp/petsc-Z_wD6e/config.headers/conftest.c:3:
/home/harshad/workspace/petsc-hg/arch-linux2-c-debug/include/magma_types.h:146:6: error: #error "One of HAVE_CUBLAS, HAVE_clAmdBlas, or HAVE_MIC must be defined. This typically happens in Makefile.internal."


On Aug 15, 2013, at 2:43 PM, Harshad Sahasrabudhe <hsahasra at purdue.edu> wrote:

> Attached is the diff and configure.log
> 
> ----- Original Message -----
> From: "Jed Brown" <jedbrown at mcs.anl.gov>
> To: "Matthew Knepley" <knepley at gmail.com>
> Cc: "Harshad Sahasrabudhe" <hsahasra at purdue.edu>, "For users of the development version of PETSc" <petsc-dev at mcs.anl.gov>
> Sent: Thursday, August 15, 2013 3:33:33 PM
> Subject: Re: [petsc-dev] Error while building MAGMA from PETSc
> 
> 
> 
> ... and send the changes you have made. One way to do that is to 'git add config/PETSc/packages/magma.py' and send the output if 'git diff master'. 
> On Aug 15, 2013 2:28 PM, "Matthew Knepley" < knepley at gmail.com > wrote: 
> 
> 
> 
> On Thu, Aug 15, 2013 at 1:56 PM, Harshad Sahasrabudhe < hsahasra at purdue.edu > wrote: 
> 
> 
> 
> 
> Hi, 
> 
> Now MAGMA compiles correctly and libmagma.a is generated, however PETSc says 
> 
> Downloaded magma could not be used. Please check install in /home/harshad/workspace/petsc-hg/arch-linux2-c-debug 
> 
> I am copying the generated library and include files to the install directory using 
> 
> includeDir = os.path.join(self.installDir, self.includedir) 
> output,err,ret = PETSc.package.NewPackage.executeShellCommand('cd '+self.packageDir+' && mv -f lib/*.* '+libDir+'/. && cp -f include/*.* '+includeDir+'/.', timeout=2500, log = self.framework.log) 
> 
> I need help in resolving this error. 
> 
> 
> 
> Always send configure.log. 
> 
> 
> Matt 
> 
> 
> Thanks, 
> Harshad 
> 
> ----- Original Message ----- 
> From: "Matthew Knepley" < knepley at gmail.com > 
> To: "Harshad Sahasrabudhe" < hsahasra at purdue.edu > 
> Cc: "For users of the development version of PETSc" < petsc-dev at mcs.anl.gov > 
> Sent: Wednesday, August 14, 2013 6:27:04 PM 
> Subject: Re: [petsc-dev] Error while building MAGMA from PETSc 
> 
> 
> On Wed, Aug 14, 2013 at 5:23 PM, Harshad Sahasrabudhe < hsahasra at purdue.edu > wrote: 
> 
> 
> 
> 
> 
> 
> Hi, 
> 
> I'm trying the write the package compiler for MAGMA using PETSc build system. I'm getting the following error while building MAGMA. With the error, I'm also getting a couple hundred warnings: 
> 
> sormqr_gpu_2stage.cpp: In function ‘magma_int_t magma_sormqr_gpu_2stages(char, char, magma_int_t, magma_int_t, magma_int_t, float*, magma_int_t, float*, magma_int_t, float*, magma_int_t, magma_int_t*)’: 
> sormqr_gpu_2stage.cpp:98: warning: unused variable ‘c_one’ 
> sormqr_gpu_2stage.cpp:107: warning: unused variable ‘lwkopt’ 
> strsm_m.cpp: In function ‘magma_int_t magma_strsm_m(magma_int_t, char, char, char, char, magma_int_t, magma_int_t, float, float*, magma_int_t, float*, magma_int_t)’: 
> strsm_m.cpp:181: warning: unused variable ‘jj’ 
> strsm_m.cpp:181: warning: unused variable ‘jjb’ 
> sgeev.cpp: In function ‘magma_int_t magma_sgeev(char, char, magma_int_t, float*, magma_int_t, float*, float*, float*, magma_int_t, float*, magma_int_t, float*, magma_int_t, magma_int_t*)’: 
> sgeev.cpp:126: warning: unused variable ‘c_n1’ 
> nvcc fatal : redefinition of argument 'gpu-architecture' 
> 
> 
> What is the easiest way to debug this kind of an error? 
> 
> 
> 
> 1) Make the MAGMA build system print out the full compile line 
> 
> 
> 2) Make the MAGMA people clean up their sloppy code, which would eliminate the warnings 
> 
> 
> Matt 
> 
> 
> 
> 
> Thanks, 
> Harshad 
> 
> 
> 
> 
> 
> -- 
> What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. 
> -- Norbert Wiener 
> 
> 
> 
> 
> -- 
> What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. 
> -- Norbert Wiener<diff_magma><configure.log>