[petsc-dev] Module missing error with petsc-dev.

[Satish Balay]

Sorry - I meant you should pull and retry 'make' - so this code will
compile fine after that.

Satish

On Tue, 27 Sep 2011, Vijay S. Mahadevan wrote:

> Ah I see. I just figured out that "gamgf.c" is the fortran interface
> for the gamg preconditioner because I run it correctly. Maybe the
> fortran stubs for the source might have to be updated.
> 
> On Tue, Sep 27, 2011 at 8:56 PM, Vijay S. Mahadevan <vijay.m at gmail.com> wrote:
> > The configure went through correctly but I had errors during make.
> >
> > ERROR IN Cxx COMPILE ******************************
> >      gamgf.c: In function ‘void pcgamgsetproceqlim_(PC, PetscInt*, int*)’:
> > gamgf.c:54:30: error: ‘PCGAMGSetProcEqLim’ was not declared in this scope
> > gamgf.c: In function ‘void pcgamgavoidrepartitioning_(PC, PetscBool*, int*)’:
> > gamgf.c:58:30: error: ‘PCGAMGAvoidRepartitioning’ was not declared in this scope
> > gamgf.c: In function ‘void pcgamgsetsolvertype_(PC, char*, PetscInt*, int*)’:
> > gamgf.c:62:35: error: ‘PCGAMGSetSolverType’ was not declared in this scope
> >
> >        Popping language Cxx
> >        Moving gamgf.o to
> > /Users/mahadevan/source/petsc-dev/arch-darwin-cxx-debug/lib/libpetsc-obj/gamgf.o
> >
> > Strangely enough, it produced the dynamic library that I can link
> > against correctly. I found that libpetsc-obj directory did not have an
> > object file "gamgf" and so nothing got moved. I assume there will be a
> > runtime error if I try to use gamg since the PC type has not been
> > registered ?
> >
> > If you want, I can send you the make.log but the above errors are the
> > only offending ones I found. Also, should it not quit after a compiler
> > error or is this the correct behavior ? It just seems a little
> > misleading.
> >
> > Vijay
> >
> > On Tue, Sep 27, 2011 at 8:30 PM, Vijay S. Mahadevan <vijay.m at gmail.com> wrote:
> >> Satish, I just pulled again after looking at your email and it updated
> >> a few changes. Now everything goes through correctly. Thanks,
> >>
> >> Vijay
> >>
> >> On Tue, Sep 27, 2011 at 8:25 PM, Satish Balay <balay at mcs.anl.gov> wrote:
> >>> I don't see this error. My cofigure went thorugh fine [on linux]
> >>>
> >>> Satish
> >>>
> >>> ----------
> >>> Configure Options: --configModules=PETSc.Configure --optionsModule=PETSc.compilerOptions --with-mpi-dir=/home/balay/soft/linux64/mpich2-1.1 --with-shared-libraries=1 --with-clanguage=cxx PETSC_ARCH=asterix64-cxx-mumps --download-parmetis=1 --download-blacs=1 --download-scalapack=1 --download-mumps=1 --download-hypre=1 --with-valgrind=1
> >>>
> >>>
> >>> On Tue, 27 Sep 2011, Vijay S. Mahadevan wrote:
> >>>
> >>>> I just pulled the dev version (source+Buildsystem) and the reconfigure
> >>>> yields errors regarding FIAT module. I do not even have the module as
> >>>> part of the configure options. Here's the command.
> >>>>
> >>>> ./configure --download-blacs=1 --download-hypre=1 --download-mumps=1
> >>>> --download-parmetis=1 --download-scalapack=1
> >>>> --known-mpi-shared-libraries=1
> >>>> --with-blas-lapack-lib=/System/Library/Frameworks/vecLib.framework/vecLib
> >>>> --with-cc=mpicc --with-clanguage=C++ --with-fc=mpif90 --with-mpi=1
> >>>> --with-shared-libraries=1 --with-valgrind=1 -with-cxx=mpicxx
> >>>> COPTFLAGS="-O3 -ftree-vectorize" CXXOPTFLAGS="-O3 -ftree-vectorize"
> >>>> FOPTFLAGS="-O3 -ftree-vectorize" PETSC_ARCH=arch-darwin-cxx-debug
> >>>> ===============================================================================
> >>>>              Configuring PETSc to compile on your system
> >>>> ===============================================================================
> >>>> *******************************************************************************
> >>>>                      UNABLE to FIND MODULE for ./configure
> >>>> -------------------------------------------------------------------------------
> >>>> No module named Fiat
> >>>> *******************************************************************************
> >>>>
> >>>>
> >>>>   File "./config/configure.py", line 269, in petsc_configure
> >>>>     framework =
> >>>> config.framework.Framework(['--configModules=PETSc.Configure','--optionsModule=PETSc.compilerOptions']+sys.argv[1:],
> >>>> loadArgDB = 0)
> >>>>   File "/Users/mahadevan/source/petsc-dev/config/BuildSystem/config/framework.py",
> >>>> line 110, in __init__
> >>>>     self.createChildren()
> >>>>   File "/Users/mahadevan/source/petsc-dev/config/BuildSystem/config/framework.py",
> >>>> line 316, in createChildren
> >>>>     self.getChild(moduleName)
> >>>>   File "/Users/mahadevan/source/petsc-dev/config/BuildSystem/config/framework.py",
> >>>> line 301, in getChild
> >>>>     config.setupDependencies(self)
> >>>>   File "/Users/mahadevan/source/petsc-dev/config/PETSc/Configure.py",
> >>>> line 61, in setupDependencies
> >>>>     utilityObj                    =
> >>>> self.framework.require('PETSc.'+d+'.'+utilityName, self)
> >>>>   File "/Users/mahadevan/source/petsc-dev/config/BuildSystem/config/framework.py",
> >>>> line 321, in require
> >>>>     config = self.getChild(moduleName, keywordArgs)
> >>>>   File "/Users/mahadevan/source/petsc-dev/config/BuildSystem/config/framework.py",
> >>>> line 301, in getChild
> >>>>     config.setupDependencies(self)
> >>>>   File "/Users/mahadevan/source/petsc-dev/config/PETSc/packages/FFC.py",
> >>>> line 11, in setupDependencies
> >>>>     self.fiat = self.framework.require('config.packages.Fiat', self)
> >>>>   File "/Users/mahadevan/source/petsc-dev/config/BuildSystem/config/framework.py",
> >>>> line 321, in require
> >>>>     config = self.getChild(moduleName, keywordArgs)
> >>>>   File "/Users/mahadevan/source/petsc-dev/config/BuildSystem/config/framework.py",
> >>>> line 274, in getChild
> >>>>     type   = __import__(moduleName, globals(), locals(),
> >>>> ['Configure']).Configure
> >>>>
> >>>> The log file does not have anything other than push-pop languages. I
> >>>> didn't see any issues when I pulled the source. Ideas ?
> >>>>
> >>>> Vijay
> >>>>
> >>>
> >>>
> >>
> >
>