VecGhost and PCFieldSplit
Matthew Knepley
knepley at gmail.com
Wed May 27 15:57:58 CDT 2009
On Wed, May 27, 2009 at 2:50 PM, Barry Smith <bsmith at mcs.anl.gov> wrote:
>
> On May 27, 2009, at 2:23 PM, Jed Brown wrote:
>
>
>> Gee, having vectors with a little extra space at the end is hard!
>>
>> Notation: J is the Jacobian, P is the associated preconditioning matrix
>>
>> PCFieldSplit gets the full row blocks (Afield) or the off-diagonal
>> blocks (B,C) from J. I implement these matrix-free and use VecGhost
>> internally. It also queries P for diagonal blocks (A,D). I provide
>> these as assembled AIJ and BAIJ matrices. It then obtains work vectors
>> by getting vecs from A and D which returns ordinary MPI vectors (no
>> ghosts).
>>
>
> You could provide the getvecs() method for the A and D matrices that you
> provide to give you the ghosted vectors that you need?
I agree with Barry. If you want to use ghosts, make everything use VecGhost.
Matt
>
> Barry
>
>
> It then tries to multiply B and C with these vectors which
>> fails because I need the ghosts. In my particular case, this could be
>> fixed by getting the work vecs from B and C, but that just pushes the
>> problem elsewhere.
>>
>> So it looks like I either have to abandon VecGhost (which I'd rather not
>> do because it would add two copies to every matrix-free multiply, and
>> these multiplies normally only touch a little more memory than a vector
>> an thus can be pretty cheap) or I need to be able to turn an unghosted
>> vec into a ghosted one (in-place since I have a Vec, not a Vec*). I can
>> think of a couple ways to do this, but they would be a maintenance
>> nightmare. There might be a way to reorganize
>> VecCreateGhostBlockWithArray to make this possible, but it still looks
>> messy to me. Any ideas?
>>
>>
>> Jed
>>
>>
>
--
What most experimenters take for granted before they begin their experiments
is infinitely more interesting than any results to which their experiments
lead.
-- Norbert Wiener
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