VecGhost and PCFieldSplit
Jed Brown
jed at 59A2.org
Wed May 27 14:23:39 CDT 2009
Gee, having vectors with a little extra space at the end is hard!
Notation: J is the Jacobian, P is the associated preconditioning matrix
PCFieldSplit gets the full row blocks (Afield) or the off-diagonal
blocks (B,C) from J. I implement these matrix-free and use VecGhost
internally. It also queries P for diagonal blocks (A,D). I provide
these as assembled AIJ and BAIJ matrices. It then obtains work vectors
by getting vecs from A and D which returns ordinary MPI vectors (no
ghosts). It then tries to multiply B and C with these vectors which
fails because I need the ghosts. In my particular case, this could be
fixed by getting the work vecs from B and C, but that just pushes the
problem elsewhere.
So it looks like I either have to abandon VecGhost (which I'd rather not
do because it would add two copies to every matrix-free multiply, and
these multiplies normally only touch a little more memory than a vector
an thus can be pretty cheap) or I need to be able to turn an unghosted
vec into a ghosted one (in-place since I have a Vec, not a Vec*). I can
think of a couple ways to do this, but they would be a maintenance
nightmare. There might be a way to reorganize
VecCreateGhostBlockWithArray to make this possible, but it still looks
messy to me. Any ideas?
Jed
-------------- next part --------------
A non-text attachment was scrubbed...
Name: signature.asc
Type: application/pgp-signature
Size: 260 bytes
Desc: OpenPGP digital signature
URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20090527/34ad933a/attachment.sig>
More information about the petsc-dev
mailing list