Unsure about some entries in log_summary for 2B DoF problem
Matthew Knepley
knepley at gmail.com
Mon May 4 13:09:14 CDT 2009
I believe that the time reported there is collective sum of times divided by
the collective sum
of the stage times. If you look at the time imbalance, it is a staggering
9.7, which either means
1) The partition is really crap (which we know isn't true)
2) Some procs spend a lot of time waiting
We can get at this waiting time with the split VecDot() events.
Matt
On Mon, May 4, 2009 at 12:58 PM, Richard Tran Mills <rmills at climate.ornl.gov
> wrote:
> PETSc folks,
>
> I was looking over the log summary data for the 2 billion degrees of
> freedom transport problem, and I'm a bit puzzled by some of the things I'm
> seeing. (I sent a tarball of this to the pflotran-dev list on April 30.)
> For instance, looking at the run at 32768 cores, I see that the total time
> for the "transport" phase is 3.2139e+02 seconds. But if I look at the
> VecDot line for the transport stage, I see
>
> Event Count Time (sec) Flops --- Global --- ---
> Stage --- Total
> Max Ratio Max Ratio Max Ratio Mess Avg len
> Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s
> VecDot 1306 1.0 4.1529e+01 9.7 1.76e+08 1.1 0.0e+00 0.0e+00
> 1.3e+03 1 0 0 0 1 3 0 0 0 24 128305
>
> It's hard to read this the way my email client will wrap it, but it's
> saying that 3% of the time in the stage was spent on VecDot()s. But the max
> time in VecDot is 4.1529e+01, close to thirteen percent. Does the "%T" for
> the stage mean something other than what I think it does?
>
> --Richard
>
> --
> Richard Tran Mills, Ph.D. | E-mail: rmills at climate.ornl.gov
> Computational Scientist | Phone: (865) 241-3198
> Computational Earth Sciences Group | Fax: (865) 574-0405
> Oak Ridge National Laboratory | http://climate.ornl.gov/~rmills<http://climate.ornl.gov/%7Ermills>
>
--
What most experimenters take for granted before they begin their experiments
is infinitely more interesting than any results to which their experiments
lead.
-- Norbert Wiener
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